Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq2112 84.2 6e-12 >seq2112 Length=10038 Score = 84.2 bits (92), Expect = 6e-12 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 41304 GAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAA 41363 |||| || |||||||||||||| || ||||||| ||||| | || || || |||| Sbjct 9195 GAACGTACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGGCGAGATCGCCGGCGAG 9136 Query 41364 TACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCG 41407 ||||||||||| || ||| ||| | | | |||||||||||||| Sbjct 9135 TACCTGCGCAAGGGCAGCTCGGTCTACGTCGAAGGCAGCCTGCG 9092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133204460523864