Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 165 9e-36 seq2098 136 5e-27 >seq3 Length=15630833 Score = 165 bits (182), Expect = 9e-36 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| |||||||| || || || ||||| || ||| | ||||| ||| | Sbjct 4183834 AATGCAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACTTTGGAGGTCGAGGCTTC 4183893 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||||| ||| | ||||| || ||||| |||||||||||||| || ||||| || Sbjct 4183894 CGATACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAGGGAATCCCACCAGATCA 4183953 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || || || || ||||| || ||||||| |||||||| | ||||| || Sbjct 4183954 GCAGAGACTCATCTTCGCCGGAAAGCAGCTTGAGGATGGACGTACCCTCTCGGACTACAA 4184013 Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608 |||| |||||||| |||||||| Sbjct 4184014 CATCCAGAAGGAATCGACTCTTCA 4184037 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| || || || ||||| || ||||| ||||| || | Sbjct 4185075 AATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACTCTCGAGGTCGAAGCTTC 4185134 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | ||| | || || || ||||| ||||||||||||||||| |||||||| Sbjct 4185135 TGACACCATCGAGAATGTCAAAGCCAAGATTCAAGACAAGGAGGGAATTCCACCAGACCA 4185194 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || || || || |||||||||||||||| ||||| || | || || || Sbjct 4185195 GCAGAGACTCATCTTCGCCGGAAAGCAACTCGAGGATGGACGTACTCTTTCCGATTACAA 4185254 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||| ||||| || | ||||| || || || Sbjct 4185255 CATCCAGAAGGAGTCTACTCTCCATCTCGTTCTTCGTCTCCGTGGAGG 4185302 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| |||||||| ||||| || || | || || ||| | | Sbjct 4186036 ATGCAGATCTTTGTCAAGACTCTTACCGGAAAGACCATCACCTTGGAAGTCGAGGCTTCT 4186095 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| ||||| || |||||||| ||||| || ||||||||| Sbjct 4186096 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGAATCCCACCAGACCAG 4186155 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||| ||||| |||||||| | || || | | ||||| || Sbjct 4186156 CAGCGCTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGACGCACTTTGTCCGACTACAAC 4186215 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||||||||| || || |||||||| || | |||||||| || ||| Sbjct 4186216 ATCCAAAAGGAGTCGACCCTTCATCTCGTTCTCCGTCTTCGTGGAGGA 4186263 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || || ||||| ||||| || || || ||| | Sbjct 1644094 ATGCAAATCTTCGTCAAGACTCTGACGGGTAAGACAATTACCCTCGAAGTCGAGGCCTCC 1644035 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | |||||||| || || |||||||| |||||||| ||||||||| Sbjct 1644034 GATACCATCGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAG 1643975 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || || |||||||||||||||| ||||| || | ||||| || Sbjct 1643974 CAAAGATTGATCTTCGCCGGAAAGCAACTCGAGGATGGACGTACTCTCTCCGACTACAAC 1643915 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || | || | |||||||| || || Sbjct 1643914 ATCCAGAAGGAGTCCACTCTCCACTTGGTTCTCCGTCTTCGTGGAGG 1643868 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || ||||| || |||||||| ||||| |||||||| | Sbjct 4184345 AATGCAGATTTTCGTGAAAACTCTTACTGGAAAGACTATCACTCTAGAGGTTGAAGCCTC 4184404 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| ||| | || || || || ||||||||||| |||||||| ||||| || Sbjct 4184405 GGACACTATTGAAAACGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 4184464 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | || || || || ||||| || ||||||| ||||||||| | ||||| || Sbjct 4184465 GCAAAGATTGATCTTCGCCGGGAAGCAGCTTGAGGATGGTCGTACCCTCTCGGACTACAA 4184524 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || || | |||||||| || || Sbjct 4184525 CATCCAGAAGGAGTCTACTCTTCACCTCGTTCTTCGTCTTCGTGGAGG 4184572 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||||||||||| ||||| || ||| | || || || | Sbjct 4185304 ATGCAGATCTTCGTCAAGACGCTTACCGGAAAGACCATCACTTTGGAAGTCGAAGCTTCG 4185363 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || || ||||| || |||||||| ||||| || ||||| ||| Sbjct 4185364 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCGCCAGATCAG 4185423 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || ||||| ||||| || ||||||| |||||| | | ||||| || Sbjct 4185424 CAACGATTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACCTTGTCCGACTACAAC 4185483 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| |||||||| || Sbjct 4185484 ATCCAGAAGGAGTCCACTCTCCA 4185506 Score = 129 bits (142), Expect = 7e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| ||||| ||| | || || || ||||| || || ||||| ||| | Sbjct 4183604 ATCATGCAAATCTTCGTCAAAACGTTGACAGGAAAAACTATCACCCTGGAGGTGGAGGCT 4183663 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| ||| | ||| | || || ||||| || |||||||| ||||| || |||||| Sbjct 4183664 TCCGATACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCACCAGAC 4183723 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | || || || || || ||||| || ||||| | | || || | ||||| Sbjct 4183724 CAGCAGAGACTCATCTTCGCCGGAAAGCAGCTTGAGGACGGAAGAACTCTTTCGGACTAC 4183783 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 || |||| ||||| |||||||| || Sbjct 4183784 AACATCCAGAAGGAGTCCACTCTCCA 4183809 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| || ||| | || || || | | Sbjct 4184574 ATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACCATCACTTTGGAAGTGGAAGCTTCT 4184633 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | || || || || || |||||||||||||| || ||||| ||| Sbjct 4184634 GACACAATCGAGAATGTCAAAGCCAAGATCCAAGACAAGGAGGGAATCCCACCAGATCAG 4184693 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || || || ||||| || ||||||| | || || | ||||| || Sbjct 4184694 CAGAGACTCATCTTCGCCGGAAAGCAGCTGGAGGATGGAAGAACTCTTTCGGACTACAAC 4184753 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||| ||||| |||||||| ||| | || | ||||| Sbjct 4184754 ATCCAGAAGGAGTCCACTCTCCATTTGGTGCTCCGTCT 4184791 Score = 118 bits (130), Expect = 1e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| ||||||||| | ||||| ||||| || || || || ||||| | Sbjct 4184801 AATGCAGATCTTCGTCAAGACGTTGACCGGAAAGACGATCACCCTCGAAGTTGAAGCTTC 4184860 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | || || || || |||||||||||||||||||| |||||||| Sbjct 4184861 GGACACCATTGAGAATGTCAAAGCCAAGATCCAGGACAAGGAGGGAATTCCACCAGACCA 4184920 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAG 27549 |||| | || || || ||||||||| Sbjct 4184921 GCAGAGACTCATCTTCGCTGGTAAG 4184945 Score = 104 bits (114), Expect = 3e-17 Identities = 317/482 (66%), Gaps = 11/482 (2%) Strand=Plus/Minus Query 80638 GCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCG 80697 || |||| || ||| ||| |||| | ||| || | | | | |||||||| | | Sbjct 10144013 GCAGCGTAGTAGATGGTCTCGAAGATTCTCTTATTGAGATCTCTGGCCTGTGGAGAGGTG 10143954 Query 80698 AACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGG 80757 || | | | ||||| |||||| ||||| || || || || |||| |||| || Sbjct 10143953 AATGGATAACGCATCAACATGAAGCAATCAGCGAGTCCTTGGACTCCGAGACCGATTGGA 10143894 Query 80758 CGGTGGCGCTTGTTCGA-TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGAC 80816 || |||||| ||||||| | || | |||| || ||| || |||| |||||| | Sbjct 10143893 CGATGGCGCATGTTCGAGTTGCGAG-CCTCTTCAACTGGATAGTAGTTGACATCGATTAT 10143835 Query 80817 GCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTG 80876 |||||| || ||| | ||| ||||| ||| || || ||| ||||| | Sbjct 10143834 CTTGTTCAGATTCTTTGTTATGACCTTGGTAACCTCAGCGAGCTTGACAAAATCGAACTT 10143775 Query 80877 GTTCCCCTT---CAC-AAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCT 80932 || | || ||| ||| | || || | ||| || |||||||| || || |||| Sbjct 10143774 CTTGTCGTTTGTCACGAAACGGTTCAAAGCA-ATGGATGCGAGATTGCAAACAGCAACCT 10143716 Query 80933 CTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCA 80992 | || | | | | |||||| || ||||||||||| || || |||| || || |||| Sbjct 10143715 CATCTGGAGCAGAGTACTCGATAATCTCCGTGCACAAGTTGGAGCACTTGATGGTTCCCA 10143656 Query 80993 GGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGG 81052 ||| | |||||| |||||| ||| || ||||||||| ||||| || || | Sbjct 10143655 AGTTCTGCTGGTTCGACTTGCGATTGGCGGCATCCTTGTAGGTGATGTATGGAAGTCCAG 10143596 Query 81053 TCTCGACCTGTGACTTGAG--GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCG 81110 |||||| | ||| | ||| ||| ||||||| || ||| ||||| || ||||| Sbjct 10143595 TCTCGA--TTTGATTGGAGACAATGTGCTCCCAAAGCTTGCGAGCCTTCACTGTTTTGCG 10143538 Query 81111 GA 81112 || Sbjct 10143537 GA 10143536 Score = 102 bits (112), Expect = 9e-17 Identities = 288/432 (67%), Gaps = 23/432 (5%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || |||| |||||||| || |||||||| ||||||||||| ||||| | |||||| || Sbjct 10144667 GTACGCAAGTAGTACATTCCAGTCTTGAGTCCCTTCTTCCATCCGTAGAAGTGCATTGAG 10144608 Query 80098 CTGA--GCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGA 80155 ||| || || | | || || ||||| |||||| || || || || ||| || Sbjct 10144607 GTGATGGCGGCGTA--GCTTGGCTTGGCCATGTGGATGTTGAGCGATTGGGATTGATCGA 10144550 Query 80156 TGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTG 80215 |||| || |||||||| || ||||| || ||||| ||| |||| || ||||| || | Sbjct 10144549 TGAATGCTCCACGATCGGCAGCCATCTCGATAATCTCCTTCTGTGAGATCTCCCAGACAG 10144490 Query 80216 TACGATACA---CCTTACGAAGCTCCTCTGGAATGTCC----AGATTTTGCACACTGCCA 80268 | | || | |||| || | || |||||||| ||| | |||||| | || Sbjct 10144489 TGAGGTAAAGTTCCTT--GATG-TCGTCTGGAAT-TCCTGGAATATTTTGGA---TGGAT 10144437 Query 80269 CCGTCCTTTACAAT---TTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGA 80325 || | || | || |||| |||| ||| | ||| | || || |||| Sbjct 10144436 CCATTGTTGGCGATGAGACGATTCTTCATGTCATCGGACCACAATCCTCTCTCAACCAGA 10144377 Query 80326 TCTTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TA 80384 || |||| | ||| || | || || || || | ||| ||||| ||| || Sbjct 10144376 TCCTTCAGCATGTGTGGATTGACGATTTGGAAGTCACCGGAGAGCACACGACG-AGAGTA 10144318 Query 80385 CAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGC 80444 | ||| | |||||| ||||||| | ||||||||||| ||||||||||| ||| || Sbjct 10144317 GATGTTAGAAGTGTATGGCTCAATCGATTCGTTGTTTCCAAGGATCTGAGCAGTGGAAGC 10144258 Query 80445 CGTCGGCATCGG 80456 || ||||| || Sbjct 10144257 AGTTGGCATTGG 10144246 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||||||||||| ||||| || ||| | || || || | Sbjct 4185760 ATGCAGATCTTCGTCAAGACGCTTACCGGAAAGACCATCACTTTGGAAGTCGAAGCTTCG 4185819 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||| || || ||||||||||| ||||| || ||||| || Sbjct 4185820 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCAGATCAA 4185879 Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547 || | | || |||||||||| Sbjct 4185880 CAAAGATTGATCTTTGCTGGTA 4185901 Score = 98.7 bits (108), Expect = 1e-15 Identities = 382/587 (65%), Gaps = 15/587 (3%) Strand=Plus/Minus Query 81179 CTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGA 81238 ||||||||||| |||||||||| ||| || || || || ||| ||||||| Sbjct 10143244 CTGGGCACTCGCATGGGCACATCAACGACCAATCTTGATCTTTTTCGACACGTTTCATGA 10143185 Query 81239 AAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCC 81297 | || || | |||||| || ||||| ||| || ||| || |||| || || Sbjct 10143184 AGAGATCTGGCACCCAGAGAGCCAAGAACAAGTCACGAGCA-CGTTCCTCTTCTGGTCCG 10143126 Query 81298 TGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACG 81357 ||| || | | | ||| || | |||||| |||||||||||||||| || | | Sbjct 10143125 GTGTTCTTTCGAAGAGCAACAAACTCGAAGATGTCGGCATGCCATGGCTCCAAGTAGATG 10143066 Query 81358 GCGATCGACCCCTTG-CG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAA 81413 |||| | | ||| | || ||| || || | |||||||| ||||| ||| | Sbjct 10143065 GCGAATG-CTCCTGGTCGCTTGTTGCCTCCTTGATCAACGTAACGAGCAGTGTTGTTGTA 10143007 Query 81414 TACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCC 81473 ||||| | ||| || |||| |||| || ||||| || || | || || || Sbjct 10143006 GACACGAAGCATTGGTATGAGTCCATTGGATGTTCCGTTGGTTCCGGCAATCACTGAACC 10142947 Query 81474 CTTGGCGCGCACCT--TGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGA 81531 | || || | || ||| |||| |||||||| || || | | |||||| ||| || Sbjct 10142946 AGTTGCACGGATCTTGTGCACATTG--AGACCGATTCCTCCGGCACTCTTTGAGATCAGA 10142889 Query 81532 GCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCAT-GTCAAGCAA 81590 || ||| | |||| || || || ||||| || || | |||| ||||| ||| Sbjct 10142888 GCGCACTGCTTCAAAGTGTCGTAGATTCCGAGAATCGAGTCCTCGCTCATCGTCAA-CAA 10142830 Query 81591 GAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTG 81650 ||| || |||||||| || | || || | ||||| || ||||| | || || Sbjct 10142829 GAAGCATGAAGACATCTGTGGACGGCATGTTCCAGAGTTGAAAAGAGTTGGCGAAGCATG 10142770 Query 81651 AATGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCAC 81709 | | || || | ||||||| || || || || | | |||| | ||| |||| | Sbjct 10142769 TGTCATGTACCGCTCCGACATCAAGTTGTACGTCTCAATCGCCGCG-GCAATGTCGTTTC 10142711 Query 81710 CGTGAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 |||| || || || || |||||||| ||||| | ||| || ||||| Sbjct 10142710 CGTGGATTCCAATGGCGACACGCATCAACATCTGCTGTGGTCTCTCG 10142664 >seq2098 Length=9782 Score = 136 bits (150), Expect = 5e-27 Identities = 222/325 (68%), Gaps = 0/325 (0%) Strand=Plus/Plus Query 24584 CGAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCGTTTGACCAACCCGAGTA 24643 |||| |||| ||||| | ||||| || ||| | ||||| || ||||||| || Sbjct 4110 CGAGATCTACAACCTGGCCGCCCAAAGCCATGTCGGCGTCTCGTTCGAGGAACCCGAATA 4169 Query 24644 CACGGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNNNN 24703 ||||||||||| || | || |||||||| | | || ||||| || ||| Sbjct 4170 CACGGCCAACGCCGACGGCCTGGGCACCCTGCGTCTCCTGGAAGCCATCCGCATCCTGAA 4229 Query 24704 NNNNNNNTTGAAATTCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCA 24763 || | | || || ||||| || ||| ||| |||| |||||| Sbjct 4230 ACTGGAGAACAAGGCCCGCTTCTACCAGGCCTCCACCTCCGAGCTGTATGGCCTGGTGCA 4289 Query 24764 GGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAA 24823 |||||||| || ||| ||||| || || |||||||| |||||||||| || | || Sbjct 4290 AGAGACGCCGCAAAAGGAAACCACGCCGTTCTATCCGCGCAGCCCGTATGCGGCGGCCAA 4349 Query 24824 GGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAA 24883 | ||| ||| |||||||| | | ||| ||||| || ||| |||| || ||||| ||||| Sbjct 4350 GCTGTACGCCTACTGGATCAGCGTGAATTACCGCGAAGCCTATGGCATGTATGCCTGCAA 4409 Query 24884 CGGAATTCTGTTCAACCATGAGTCG 24908 ||| || ||||||||||| || ||| Sbjct 4410 CGGCATCCTGTTCAACCACGAATCG 4434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570287238268880