Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_028832.1 Length=61511 Score E Sequences producing significant alignments: (Bits) Value seq2875 95.1 5e-15 >seq2875 Length=2430 Score = 95.1 bits (104), Expect = 5e-15 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 54623 ATGCCCGACGCACATTTCGGCAAAGGCAGCTCGGTCGGCACAGTCATCCCCACCCAAGGC 54682 ||||| |||| || | ||||| ||| | || ||| | || ||||| || || ||| Sbjct 607 ATGCCGGACGTGCACCTGGGCAAGGGCGCGACCGTGGGCTCGGTGATCCCGACGCAGGGC 666 Query 54683 GCCGTCATCCCGGCCGCCGTCGGCGTCGACATCGGCTGCGGCATGATCGCAGCCCGCACC 54742 || ||||||||||||| ||||||||||||||||||||||||||| ||| | ||||| Sbjct 667 GCGATCATCCCGGCCGCGGTCGGCGTCGACATCGGCTGCGGCATGGCCGCGGTGCGCACT 726 Query 54743 AC 54744 || Sbjct 727 AC 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196706010420474