Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq1457 84.2 4e-11 >seq1457 Length=22817 Score = 84.2 bits (92), Expect = 4e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 294855 TGAATATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGC 294914 |||| |||||| | |||||||||||||| | ||||||||||||| ||||||||||| Sbjct 2725 TGAAAATGGTGAGCGCGCAGGGATTCGAACCC-TGGACCTACTGATTAAAAGTCAGTTGC 2783 Query 294915 TCTACCAGCTGAGCTA 294930 |||||| ||||||||| Sbjct 2784 TCTACCGGCTGAGCTA 2799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989293216173097