Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_029000.1 Length=162327 Score E Sequences producing significant alignments: (Bits) Value seq1775 82.4 8e-11 >seq1775 Length=16941 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 66727 ATTTAAAAATTTGGTGCCGGTTGTCCGATTCGAACGGACCACCCCATCATTACAAGTGAA 66786 |||||||||| ||||||| || | || |||||| | ||||||||||||| | ||| Sbjct 2666 ATTTAAAAAT--GGTGCCGCTTAGCAGACTCGAACTGCTGACCCCATCATTACGAATGAT 2609 Query 66787 GTGCTCTACCAAATGAGCTAAACCGGC 66813 |||||||||||| ||||||||| |||| Sbjct 2608 GTGCTCTACCAACTGAGCTAAAGCGGC 2582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519297309181480