Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq2875 89.7 3e-13 >seq2875 Length=2430 Score = 89.7 bits (98), Expect = 3e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 47495 GTCGCCCTGATGCCGGATGCACACGGCGGCAAAGGATCTGCCGTTGGCACGGTGATTCCC 47554 || ||| |||||||||| | ||| ||||| || | |||| ||| ||||||| || Sbjct 598 GTGGCCGTGATGCCGGACGTGCACCTGGGCAAGGGCGCGACCGTGGGCTCGGTGATCCCG 657 Query 47555 ACCGTGGATGCCGTGATCCCGGCCGCGGTCGGCGTGGACATCGGCTGCGGCATG 47608 || || || | |||||||||||||||||||| |||||||||||||||||| Sbjct 658 ACGCAGGGCGCGATCATCCCGGCCGCGGTCGGCGTCGACATCGGCTGCGGCATG 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297908203205900