Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq2875 93.3 3e-14 >seq2875 Length=2430 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 48191 GTCGCCCTCATGCCGGATGCACACGGCGGCAAAGGATCTGCCGTCGGCACGGTGATTCCC 48250 || ||| | |||||||| | ||| ||||| || | |||| ||| ||||||| || Sbjct 598 GTGGCCGTGATGCCGGACGTGCACCTGGGCAAGGGCGCGACCGTGGGCTCGGTGATCCCG 657 Query 48251 ACGGTGGACGCCGTGATCCCGGCCGCGGTCGGCGTGGACATCGGCTGCGGCATG 48304 ||| || ||| | |||||||||||||||||||| |||||||||||||||||| Sbjct 658 ACGCAGGGCGCGATCATCCCGGCCGCGGTCGGCGTCGACATCGGCTGCGGCATG 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299658533894983