Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq2112 87.8 5e-13 >seq2112 Length=10038 Score = 87.8 bits (96), Expect = 5e-13 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 26978 CGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCC 27037 ||||| | |||||| | | | ||| |||||| ||||||||||| || || ||||| || Sbjct 9092 CGCAGGCTGCCTTCGACGTAGACCGAGCTGCCCTTGCGCAGGTACTCGCCGGCGATCTCG 9151 Query 27038 GCCAGCTTGCCGAAGATGACAACGCGGTGCCATTCCGT 27075 | ||||||||||||| || |||||||||||||| || Sbjct 9152 CCGAGCTTGCCGAAGAACACCACGCGGTGCCATTCGGT 9189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134010829411440