Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3649 91.5 1e-13 >seq3649 Length=974952 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 14257 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 14316 ||| ||||||||||| | |||||| || || | ||| || |||| ||||| ||||| Sbjct 67588 TGTCAATCCTGGCATGAGTCCTCGCTTCTTGAGCCAGAAGATTGAGGCGAACGATCCACT 67529 Query 14317 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14376 ||||| ||||| || || || || || || || | ||||| | ||||| || || || Sbjct 67528 GAAGAAGATTCCTTCGACAGCGGCGAAGGCGATGAGACGTTCGGCGAACGACGCCTTCTT 67469 Query 14377 GTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATC 14424 || ||| ||||| || ||||||| || | || || || || || || Sbjct 67468 GTCCGAGATCCACTTCATAGCCCAGTCGGCCTTCTTCTTGATGAATTC 67421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482323472395600