Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq3658 86.0 5e-12 >seq3658 Length=1447888 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || |||||||| || |||||||| |||| | ||| | |||| || ||||| || || Sbjct 43737 GTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTTCTTCCGTCTTCAAGCTGCTTTCCG 43796 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || | || |||||||||||||| || | ||||||||||| || || ||| Sbjct 43797 GCGAAGATGAGTCTCTGCTGATCTGGTGGGATTCCCTCTTTGTCTTGGATCTTGGCTTTG 43856 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | || ||| || |||| || | ||| |||||||| || || || ||| Sbjct 43857 ACATTCTCAATGGTGTCGGAAGCCTCCACCTCCAAGGTGATGGTTTTTCCAGTCAACGTT 43916 Query 19025 TTGACAAAAATTTGCAT 19041 || || || |||||||| Sbjct 43917 TTCACGAAGATTTGCAT 43933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414554256935980