Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq3664 86.0 3e-12 >seq3664 Length=2010644 Score = 86.0 bits (94), Expect = 3e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 3863 ACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAA 3922 ||||| |||||||| || || || ||||||||||| ||||| ||| ||||| || ||| Sbjct 68170 ACCGATGGAAAAGGAGTTCACTTGATGATGGCTGATGGTGGATTCAGTGTTGAAGGACAA 68111 Query 3923 GAAAATATGCAAGAAATGTTATCGAAA 3949 ||||| || |||||||| |||||||| Sbjct 68110 GAAAACATTCAAGAAATCCTATCGAAA 68084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276541230276010