Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq582 84.2 3e-11 >seq582 Length=3605 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 193688 AGCGGGAGGTGGATTTGAACCACCGACCTTTAGCTTATGAGGCTAACGAGATTCCAGACT 193747 |||||||| ||||||||||||| ||||||| | ||||||| | ||||| | ||||||| Sbjct 3007 AGCGGGAGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGACT 3066 Query 193748 TCTCCATCCCGCTTCA 193763 ||||||||||| ||| Sbjct 3067 GCTCCATCCCGCATCA 3082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720696536529600