Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3630 226 1e-53 seq3658 197 5e-45 seq3663 138 4e-27 seq2032 122 3e-22 seq591 118 4e-21 seq3636 111 6e-19 seq3664 105 3e-17 seq3667 100 1e-15 seq3656 89.7 2e-12 >seq3630 Length=571110 Score = 226 bits (250), Expect = 1e-53 Identities = 397/572 (69%), Gaps = 16/572 (3%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||| || ||||| ||||||| ||| |||||||||||||||||| | || | || Sbjct 458241 AATCCAGACGAAGCAGTTGCATTTGGAGCTGCAGTTCAAGCAGCTGTACTTTCTGGAGTG 458300 Query 452051 GATGATGAAA-AATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | ||| ||| ||||| |||| | | | || ||||| | || | ||||||| | Sbjct 458301 AAGGATCAAACAATTAA-AGATGTATTACTGGTTGATGTTGCTCCATTGAGTCTTGGAAT 458359 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 ||| ||||||||||| ||||||| || |||||| | ||| ||| ||||| || Sbjct 458360 TGAGACAGCTGGTGGTGTGATGACCAACTTAATTGATCGAAACACTCGAATTCC----AA 458415 Query 452170 --AAAGAGTC--AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAG 452225 |||| ||| ||||||| | ||| |||||| |||||||| || | || |||| Sbjct 458416 CGAAAGCGTCGAAAACATTCACAACATATGCTGATAATCAACCAGGAGTTTCAATCCAAG 458475 Query 452226 TGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTT 452285 | | |||||||||||||| ||||| || |||||| | || ||| ||| |||| Sbjct 458476 TTTACGAAGGAGAACGTGCCATGACTCGTGATAATCACCGTCTCGGAACATTCGAACTTT 458535 Query 452286 CAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345 | ||||||||| ||| | || ||||||||||||| | || | |||| | |||| Sbjct 458536 CTGGAATTCCTCCTGCTCCACGTGGTGTTCCTCAAATTGAAGTCACTTTTGATATCGATG 458595 Query 452346 CAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTA 452405 ||||||| || | |||||| || | || |||||| |||||||| | | ||| | Sbjct 458596 CAAATGGAATATTGAATGTGTCGGCTGAGGATAAATCAACTGGAAAAACGAATCGAATCA 458655 Query 452406 CAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 ||||| ||||| ||| || ||||| ||| |||||||| | ||||||| | |||| Sbjct 458656 CAATTCGAAATGAGAAAGGACGATTATCGCAAGCTGATATTGATAGAATGGTAAACGAAG 458715 Query 452466 CAGAAAAATTC---AAGGATGATGATGAACAAGTTAGAAAACATGTTGAAGCTAAAAACA 452522 | || ||||| || || |||| ||||||| | ||| |||| ||| ||| Sbjct 458716 CGAAACAATTCGAGAAAGAAGATGGTGAACAA---CGGGAACGTGTTATGGCTCGAAATC 458772 Query 452523 AACTAGAAGGATATTGTTATCAAATGAAACAA 452554 || | |||| |||| | ||| |||||||| Sbjct 458773 AATTGGAAGCATATGCATTCCAAGTGAAACAA 458804 Score = 197 bits (218), Expect = 5e-45 Identities = 264/364 (73%), Gaps = 6/364 (2%) Strand=Plus/Plus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| |||||||| ||| | ||||| ||| || ||||| ||||| || ||| |||| | Sbjct 457438 TCCAGAAGAAATCTCAGCAATGGTACTTCAGAAGATGAAGGAAACGGCGGAAACATATGT 457497 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 ||| | | | | |||||||| |||||||| || || ||||||||||| || | Sbjct 457498 TGGACATGCGATAAAAGATGCAGTGATTACTGTACCTGCATATTTCAATGACAGTCAGAG 457557 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 |||||||| |||||||||| | |||||||| || |||| ||||||| || ||||| Sbjct 457558 ACAAGCAACAAAAGATGCAGCAACAATTGCTGGATTGAATGCAATTCGAATAATCAATGA 457617 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaa 451482 ||| || ||||||||||| || |||||| | ||| || | | || ||||| || || Sbjct 457618 ACCAACTGCAGCTGCTCTTGCTTATGGA-TTGGATAA--AGGAATAAGCGAAGAGAAGAA 457674 Query 451483 TATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT---TGA 451539 | | || |||| ||| |||| ||||| ||| |||| ||| | ||||| || ||| Sbjct 457675 TGTATTGATATTCGATCTTGGAGGAGGTACTTTTGATGTTTCAATTCTTTCCATTTCTGA 457734 Query 451540 AGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATAT 451599 || |||| ||||| || |||| ||||||||||||||| ||||| |||||| | Sbjct 457735 AGGATCAATATTCGAAGTGAAATCAACAGCTGGTGATACTCATCTTGGAGGAGAAGATTT 457794 Query 451600 TGAT 451603 ||| Sbjct 457795 CGAT 457798 Score = 127 bits (140), Expect = 8e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| |||||||| ||| | ||||| ||| || ||||| ||||| || ||| |||| | Sbjct 456051 TCCAGAAGAAATCTCAGCAATGGTACTTCAGAAGATGAAGGAAACGGCGGAAACATATGT 455992 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 ||| | | | | |||||||| |||||||| || || ||||||||||| || | Sbjct 455991 TGGACATGCGATAAAAGATGCAGTGATTACTGTACCTGCATATTTCAATGACAGTCAGAG 455932 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 |||||||| |||||||||| | |||||||| | |||| ||||||| || ||||| Sbjct 455931 ACAAGCAACAAAAGATGCAGCAACAATTGCTGGATGGAATGCAATTCGAATAATCAATGA 455872 Query 451423 ACCTACAGCAGCTGC 451437 ||| || |||||||| Sbjct 455871 ACCAACTGCAGCTGC 455857 >seq3658 Length=1447888 Score = 197 bits (218), Expect = 5e-45 Identities = 264/364 (73%), Gaps = 6/364 (2%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| |||||||| ||| | ||||| ||| || ||||| ||||| || ||| |||| | Sbjct 1289336 TCCAGAAGAAATCTCAGCAATGGTACTTCAGAAGATGAAGGAAACGGCGGAAACATATGT 1289277 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 ||| | | | | |||||||| |||||||| || || ||||||||||| || | Sbjct 1289276 TGGACATGCGATAAAAGATGCAGTGATTACTGTACCTGCATATTTCAATGACAGTCAGAG 1289217 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 |||||||| |||||||||| | |||||||| || |||| ||||||| || ||||| Sbjct 1289216 ACAAGCAACAAAAGATGCAGCAACAATTGCTGGATTGAATGCAATTCGAATAATCAATGA 1289157 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaa 451482 ||| || ||||||||||| || |||||| | ||| || | | || ||||| || || Sbjct 1289156 ACCAACTGCAGCTGCTCTTGCTTATGGA-TTGGATAA--AGGAATAAGCGAAGAGAAGAA 1289100 Query 451483 TATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT---TGA 451539 | | || |||| ||| |||| ||||| ||| |||| ||| | ||||| || ||| Sbjct 1289099 TGTATTGATATTCGATCTTGGAGGAGGTACTTTTGATGTTTCAATTCTTTCCATTTCTGA 1289040 Query 451540 AGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATAT 451599 || |||| ||||| || |||| ||||||||||||||| ||||| |||||| | Sbjct 1289039 AGGATCAATATTCGAAGTGAAATCAACAGCTGGTGATACTCATCTCGGAGGAGAAGATTT 1288980 Query 451600 TGAT 451603 ||| Sbjct 1288979 CGAT 1288976 Score = 120 bits (132), Expect = 1e-21 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || || ||||| || || || || || || |||||| | || Sbjct 43706 AATGCAAATCTTCGTGAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAAGCCTC 43647 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | |||||| | || || || ||||| |||||||||||||| || ||||| Sbjct 43646 GGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGATCA 43587 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || ||| | || || |||||||| |||||| | |||||| | ||||| || Sbjct 43586 GCAAAGACTCATCTTCGCTGGAAAGCAACTTGAGGATGGACGTACTTTGTCCGATTACAA 43527 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 ||| | ||||| | ||||| ||||| || | | || |||||| ||| || Sbjct 43526 TATCCAAAAGGAATCTACACTCCACTTGGTTCTCCGTCTCAGAGGAGGAATGCA 43473 Score = 118 bits (130), Expect = 4e-21 Identities = 231/339 (68%), Gaps = 7/339 (2%) Strand=Plus/Minus Query 452219 ATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT 452278 || ||||| | |||||||||||||| ||||| || |||||| | || ||| ||| Sbjct 1287469 ATCCAAGTTTACGAAGGAGAACGTGCTATGACTCGTGATAATCACCGTCTCGGAACATTC 1287410 Query 452279 ACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGAT 452338 ||||| |||| || | ||| | || || |||||||||| | || | |||| Sbjct 1287409 GAACTTTCTGGAATTC-TCGTGCTCCACGTGGTGTTCGTCAAATTGAAGTCACTTTTGAT 1287351 Query 452339 GTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA 452398 | ||||||||||| || | |||||| || | || |||||| |||||||| | | Sbjct 1287350 ATCGATGCAAATGGAATATTGAATGTGTCGGCTGAGGATAAATCAACTGGAAAAACGAAT 1287291 Query 452399 AAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTA 452458 ||| |||||| ||||| ||| || ||||| ||| |||||||| ||||||| Sbjct 1287290 CGAATCACAATTCGAAATGAGAAAGGACGATTATCGCAAGCTGATATTGATCGAATGGTA 1287231 Query 452459 GATGAAGCAGAAAAATTC---AAGGATGATGATGAACAAGTTAGAAAACATGTTGAAGCT 452515 | ||||| || ||||| || || |||| ||||||| | ||| |||| ||| Sbjct 1287230 AACGAAGCGAAACAATTCGAGAAAGAAGATGGTGAACAA---CGGGAACGTGTTATGGCT 1287174 Query 452516 AAAAACAAACTAGAAGGATATTGTTATCAAATGAAACAA 452554 ||| || | |||| |||| | ||| |||||||| Sbjct 1287173 CGAAATCAATTGGAAGCATATGCATTCCAAGTGAAACAA 1287135 Score = 114 bits (126), Expect = 5e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || |||||||| || ||| | ||| Sbjct 41970 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAAGCCTCT 41911 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | | || || |||||||| |||||||||||||| || ||||| Sbjct 41910 GACACCATTGAAAATGTGAAGGCTAAGATTCAAGACAAGGAAGGAATTCCACCAGATCAG 41851 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || ||||| ||||||||| | || ||| |||| || || Sbjct 41850 CAGAGACTCATCTTCGCTGGAAAGCAACTCGAAGATGGACGCACCTTGTCGGACTACAAC 41791 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | || ||||| Sbjct 41790 ATCCAGAAGGAGTCGACCCTTCA 41768 Score = 100 bits (110), Expect = 1e-15 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || || || || || || || ||| | ||| Sbjct 41240 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTCGAAGCCTCT 41181 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || || ||||| |||||||| || || || || ||| Sbjct 41180 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGACCAA 41121 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| |||||| | || || || || || |||||| | || ||| |||| || || Sbjct 41120 CAACGTTTGATTTTCGCCGGAAAGCAGCTCGAGGATGGACGGACCTTGTCGGACTACAAC 41061 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| |||| ||||| Sbjct 41060 ATCCAAAAGGAGTCAACTCTTCA 41038 Score = 86.0 bits (94), Expect = 2e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || || || || || || |||||| | ||| Sbjct 42471 ATGCAAATCTTCGTGAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAAGCTTCT 42412 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct 42411 GACACCATTGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGATCAG 42352 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 ||| | | || || | || || |||||||| |||||| | ||| Sbjct 42351 CAAAGACTCATCTTTGCTGGAAAGCAACTTGAGGATGGACGTACT 42307 >seq3663 Length=2118579 Score = 138 bits (152), Expect = 4e-27 Identities = 345/514 (67%), Gaps = 15/514 (3%) Strand=Plus/Minus Query 451989 TAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT- 452047 ||||||| ||||||||||| |||| ||| ||||| || ||||||||| | || | || Sbjct 362587 TAAATCCGGATGAAGCTGTCGCATTTGGAGCTGCTGTCCAAGCAGCTGTACTTTCTGGAG 362528 Query 452048 TCAGATGATGAAA-AATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGG 452106 ||| | || || | ||| | | ||| | || | || ||||| |||| | |||||| Sbjct 362527 TCAAA-GACGACACAATCAAG-GATGTATTGCTTGTCGATGTTGCACCATTGAGTCTTGG 362470 Query 452107 AGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTG 452166 | ||||||| ||||| ||| | ||||||| | | ||| | || || | ||||| Sbjct 362469 AATTGAAACTGCTGGAGGAGTTATGACTAGTATTATTGATAGAAATACCACAATTCCAAC 362410 Query 452167 TAAAAAGAGTC--AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAA 452224 ||||| || |||| || | ||| ||| || ||| || || |||||| Sbjct 362409 --AAAAGCTTCGAAAACTTTCACCACATATTCTGACAATCAAGCATCAGTTTTCATTCAA 362352 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATT--TACTC 452282 || | ||||||||||||||||||||| || |||||| | || || ||| |||| Sbjct 362351 GTCTATGAAGGAGAACGTGCAATGACTCGTGATAATCACCGTCTTGGTACATTCGAACTC 362292 Query 452283 TTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTG 452342 | | | ||||||||| ||| | ||| ||| ||||||||| | || | ||| | | Sbjct 362291 TCTGGA--ATTCCTCCTGCTCCACGTGGAGTTCCACAAATTGAAGTCACTTTCGATATCG 362234 Query 452343 ATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAA 452402 |||| ||||| ||||| || || || | || |||||| | |||||||| | || Sbjct 362233 ATGCGAATGGAATTCTGAACGTATCCGCTGAAGACAAATCAACCGGAAAATCGAATCGAA 362174 Query 452403 TTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATG 452462 | || ||| ||||| || | || || ||| |||||||| ||||| | | Sbjct 362173 TCACTATTCGAAATGAAAAGGGAAGATTGTCGCAAGGTGATATTGATCGTATGGTGAACG 362114 Query 452463 AAGCAGAAAAATT---CAAGGATGATGATGAACA 452493 |||| | |||| || || |||| |||||| Sbjct 362113 AAGCGAAGCAATTTGAGAAAGAAGATGCTGAACA 362080 >seq2032 Length=7970 Score = 122 bits (134), Expect = 3e-22 Identities = 216/311 (69%), Gaps = 18/311 (6%) Strand=Plus/Plus Query 451311 CAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAA 451370 |||| || || || || ||||| ||||| ||||| ||||||||||||||||| ||||||| Sbjct 2321 CAGTAACAGAAGCTGTTATTACAGTTCCTGCTTACTTCAATGATGCACAACGTCAAGCAA 2380 Query 451371 CTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAG 451430 | |||||||| || | |||||||||| || | ||| || || ||||| ||||| || | Sbjct 2381 CAAAAGATGCTGGTCGTATTGCTGGTCTAGAAGTTAAACGTATCATTAACGAACCAACTG 2440 Query 451431 CAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAG 451490 | ||||| || || | || | ||| || |||||| || || || || | Sbjct 2441 CTGCTGCACTTGCGTTCGGTAT-GGACAA--AAAAGA---AGGCGACCGTAAAGTTGCTG 2494 Query 451491 TATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT---TGA---AGATG 451544 ||| ||| || ||||| || || ||| || | || ||| ||| ||||| Sbjct 2495 TATATGACTTAGGTGGTGGTACATTTGACGTATCAATCATTGAAATCGCTGACTTAGATG 2554 Query 451545 GGG------TATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATA 451598 | | | | |||||| | |||||||||||||||| || || |||||||| Sbjct 2555 GCGACCAACAAATCGAAGTATTGTCAACCAATGGTGATACATTCCTTGGTGGTGAAGACT 2614 Query 451599 TTGATAATGCA 451609 ||||||||||| Sbjct 2615 TTGATAATGCA 2625 >seq591 Length=4206 Score = 118 bits (130), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 63857 TCCACCAATTATTTAAATTACCATCCGCATCAAATCTTTTTCCTTGATCATCAAACCCAT 63916 |||||||||| || | ||| || ||||||| | ||||| |||||||| |||| Sbjct 1222 TCCACCAATTTTTCATATTGCCCAATTCATCAAACTGACTGCCTTGGTCATCAAAGCCAT 1163 Query 63917 GAGTGATTTCATGAGCTATAACTACTCCAATTCCTCCATAATTTTGTGCA--ATCGTATA 63974 || |||| ||||| | |||| | | ||||| | ||||| || |||| |||| Sbjct 1162 GACTGATCTCATGTCCGATAATTGCCCCAATCGCACCATAGTTCACTGCATCATCGGC-- 1105 Query 63975 ATCTAAACTaaaaaaaGGTGGTTGTAAAATAGCAGCTGGAAATACAATTTCATTTAATAA 64034 ||| | | ||| || || ||||||||||| || |||||||| ||||||||||||||| | Sbjct 1104 ATCCATATCAAAGAATGGAGGTTGTAAAATGGCTGCTGGAAAGACAATTTCATTTAATGA 1045 Query 64035 AGGATGATAATAAGCATT 64052 || || ||||||||||| Sbjct 1044 AGCATTGTAATAAGCATT 1027 >seq3636 Length=634842 Score = 111 bits (122), Expect = 6e-19 Identities = 197/284 (69%), Gaps = 10/284 (4%) Strand=Plus/Minus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 ||||| || |||||||| || || || |||||||| || || ||||| || |||||| Sbjct 358991 GATGCTGTGATTACTGTACCTGCCTACTTCAATGACAGTCAGCGTCAAGCTACCAAAGAT 358932 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || | | ||||||||| | |||| | |||| || || |||||||| || ||||||||| Sbjct 358931 GCTGCAACCATTGCTGGTCTCAATGCTATTCGTATCATCAATGAACCAACTGCAGCTGCT 358872 Query 451439 CTAGCATATGGACTAGGAAAATCAAAAGAAACA--GAAGaaaaaaaTATTTTAGTATTTG 451496 || || || ||| | ||| ||| ||| || || || ||||| |||| | || | Sbjct 358871 CTCGCTTACGGA-TTGGA----CAAGGGAATCAATGAGGAGAAAAACGTTTTGATCTTCG 358817 Query 451497 ATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT---TGAAGATGGGGTATTTG 451553 |||| || || || || ||| || | || || || ||||| | || | Sbjct 358816 ATTTGGGAGGTGGTACATTCGATGTATCAATTCTATCGATCGCTGAAGGATCCATTTTCG 358757 Query 451554 AAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 |||| | | ||| || ||||||||||| |||||||||||| Sbjct 358756 AAGTGAGATCTACCGCCGGAGATACTCATCTCGGAGGTGAAGAT 358713 >seq3664 Length=2010644 Score = 105 bits (116), Expect = 3e-17 Identities = 238/355 (67%), Gaps = 6/355 (2%) Strand=Plus/Plus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||| |||| |||||||||| || || ||||| ||| || || ||| Sbjct 680019 CTCCAGAAGAAGTTTCCGCTATGGTTCTCACCAAGATGAAGCAAATCGCTGAGTCTTATC 680078 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||| | |||| || | || || || || || ||||||||||| || Sbjct 680079 TCGGACACGAAGTGAAAAATGCTGTTGTCACAGTCCCGGCATACTTCAATGATGCTCAGA 680138 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || |||||||| ||| ||||| || | || ||| | |||| || |||| Sbjct 680139 GACAAGCTACCAAAGATGCTGGAACCATTGCAGGACTCAACGTTGTCAGAATCATCAATG 680198 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 | || ||||| || || | || ||||| | ||| || ||||| || |||| | Sbjct 680199 AGCCGACAGCTGCCGCAATTGCCTATGG-GTTGGATAA--GAAAGA---AGGAGAACGCA 680252 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 ||||| | || || || || || || |||||| ||| || | || | || || Sbjct 680253 ATATTCTCGTCTTCGACTTGGGAGGTGGAACTTTTGACGTGTCCCTTCTCACCATCGACA 680312 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 | || || || ||||| || |||||||| ||||| || | ||||| ||||| Sbjct 680313 ACGGTGTTTTCGAAGTTCTTGCCACCAATGGAGATACCCACTTGGGAGGAGAAGA 680367 >seq3667 Length=2326506 Score = 100 bits (110), Expect = 1e-15 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 |||||||| ||||||||||||||| | || || ||||| ||||| ||||| ||||| ||| Sbjct 1302967 ACTGTTCCAGCTTATTTCAATGATTCTCAGCGACAAGCCACTAAGGATGCTGGACAAATT 1302908 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 | ||| | || || ||||| | ||||| || || || || ||||| || || |||||| Sbjct 1302907 TCCGGTCTCAACGTCCTTCGTGTCATTAACGAGCCAACTGCTGCTGCACTTGCCTATGGA 1302848 >seq3656 Length=1650993 Score = 89.7 bits (98), Expect = 2e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 63853 TCACTCCACCAATTATTTAAATTACCATCCGCATCAAATCTTTTTCCTTGATCATCAAAC 63912 ||||||||||| |||| || || |||||| |||| || |||||||||||| ||| Sbjct 663522 TCACTCCACCAGTTATGCAAGTTTCCATCCTTATCATATTGAGATCCTTGATCATCGAAC 663581 Query 63913 CCATGAGTGATTTCATGAGCTATAACTACTCCAATTCCTCCATAATT 63959 ||||| ||||||||||| | |||||| ||||||| |||| || || Sbjct 663582 CCATGTGTGATTTCATGTCCGATAACTGCTCCAATGGCTCCGTAGTT 663628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975625498016360