Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_019507.1 Length=182833 Score E Sequences producing significant alignments: (Bits) Value seq1843 89.7 6e-13 >seq1843 Length=6993 Score = 89.7 bits (98), Expect = 6e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 101366 GCTGTTGCCCATAAAATGAAACGCAAATGGATAGGCATAGAACAAATGGATTATATAGAA 101425 ||||| || || || ||| ||||| |||||| || || || |||||||| || || ||| Sbjct 5296 GCTGTCGCTCACAAGATGGGACGCAGATGGATTGGTATTGAGCAAATGGACTACATCGAA 5355 Query 101426 ACTATCACAAAAGAAAGACTCAAAAAAGTCATAGAAGGTGAGCAAGGTGGTATCAGCAAA 101485 ||| || |||| | | |||||| | || ||||| ||||||||||| ||| Sbjct 5356 GATATAACCAAAGCTCGCTTACTGAAAGTCCTTGAGGGTGAACAAGGTGGTATTTCTAAA 5415 Query 101486 GCAGTAAATTGGCAAGGTGGTGGAAGTTTTGTTTATGCTGAACT 101529 | || |||||||||||||||| ||||||||| ||| || Sbjct 5416 TCGGTGGATTGGCAAGGTGGTGGTTCATTTGTTTATTTTGAGCT 5459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584910765987600