Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3667 87.8 1e-12 >seq3667 Length=2326506 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548 |||| ||||| | || ||||| ||||| || ||| || ||||||||||||||| Sbjct 1432782 ATGGGTGGACGCTCGAGAGCCTTCGCGATATCAAACATATTTGTGATGACAGTCTTGATT 1432841 Query 34549 CCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCG 34608 ||||| || || |||||||| || || | | ||||| |||||||| ||||||| | Sbjct 1432842 CCGTTTCCTTTGCCTTCGACTTTAGCCGACAATTTTGGCATCTTGTAGCGATAGAACGGG 1432901 Query 34609 TCCGCCACATTGCGGTTAACGTT 34631 || || || |||||| ||||| Sbjct 1432902 TCGGCGACGGCGCGGTTCACGTT 1432924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412823134369310