Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3263 149 1e-29 seq1032 149 1e-29 seq1971 145 1e-28 seq3667 136 6e-26 seq3665 136 6e-26 seq3657 136 6e-26 seq3650 136 6e-26 seq3654 131 3e-24 seq3651 127 3e-23 seq2563 116 6e-20 seq1985 114 2e-19 seq3649 104 4e-16 >seq3263 Length=30027 Score = 149 bits (164), Expect = 1e-29 Identities = 171/228 (75%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||||| |||| ||||| || | | Sbjct 5947 TGTACTTGGTGACAGCCTTGGTTCCCTCGGAGACGGCGTGCTTGGCGAGTTCTCCCGGAA 6006 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 |||||| || ||||| |||||||| || || | ||| || ||||||| || | Sbjct 6007 GGATCAGACGAACGGCCGTCTGGATTTCACGAGACGAGATTGTCGATCGCTTGTTGTAAT 6066 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || ||| |||| ||||||| |||| | ||||||||| |||||||| Sbjct 6067 GAGCG--AGACGAGAGGCTTCGGCAGCGATGCGCTCGAAGACGTCGTTGACGAACGAGTT 6124 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 |||||| ||||| | ||| ||||| || ||| ||||| ||||| Sbjct 6125 CATGATTGACATGGCTTTCGAGGAGACTCCGGTGTCAGGGTGGACCTG 6172 >seq1032 Length=2756 Score = 149 bits (164), Expect = 1e-29 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || || || |||||| |||| ||||| || | | Sbjct 885 TGTACTTGGTGACGGCCTTGGTTCCTTCAGACACAGCGTGCTTGGCGAGTTCTCCTGGAA 826 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| || || || |||||||| ||||| | ||| || |||||||| | Sbjct 825 GAATCAGACGGACAGCCGTCTGGATTTCGCGAGAAGAGATGGTCGAACGCTTGTTGTAGT 766 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || |||||| | |||| || |||| | |||||||||||||||||||| Sbjct 765 GAGCAAGACGAGAGGCCTCAGCAGCGATACGCTCGAAGACGTCGTTGACAAACGAGTTCA 706 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | |||| ||||| || ||| ||||| || |||||||| || Sbjct 705 TGATGGACATGGCTTTGGAGGAGACTCCAGTGTCTGGGTGAACTTGCTTGAGAAC 651 >seq1971 Length=6788 Score = 145 bits (160), Expect = 1e-28 Identities = 170/228 (75%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||||| | || ||||| || | | Sbjct 2443 TGTACTTGGTGACAGCCTTGGTTCCCTCGGAGACGGCGTGCTTCGCGAGTTCTCCCGGAA 2502 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 |||||| || ||||| |||||||| || || | |||||| ||||||| || | Sbjct 2503 GGATCAGACGAACGGCCGTCTGGATTTCACGAGACGAGATCGTCGAACGCTTGTTGTAAT 2562 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || ||| |||| ||||||| |||| | ||||||||| ||||| || Sbjct 2563 GAGCG--AGACGAGAGGCTTCGGCAGCGATGCGCTCGAAGACGTCGTTGACGAACGAATT 2620 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 |||||| ||||| | ||| ||||| || ||| ||||| ||||| Sbjct 2621 CATGATTGACATGGCTTTCGAGGAGACTCCGGTGTCAGGGTGGACCTG 2668 >seq3667 Length=2326506 Score = 136 bits (150), Expect = 6e-26 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| ||||| |||||| |||| || || || | | Sbjct 1695264 TGTACTTGGTAACAGCCTTGGTTCCCTCAGAGACAGCGTGCTTGGCGAGCTCTCCTGGAA 1695323 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||| || ||||| || || || ||||||| ||| || | |||||| | Sbjct 1695324 GAATCAAACGGACGGCCGTTTGAATTTCGCGGGAAGAGATGGTCGATCTCTTGTTGTAGT 1695383 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || |||||||| | ||||||| |||| | ||| ||||| |||||||||| Sbjct 1695384 GAGCAAGACGAGAGGCCTCGGCGGCGATGCGCTCGAAGACGTCATTGACGAACGAGTTCA 1695443 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||||||| | ||| |||| || ||| || || ||||||||||| || Sbjct 1695444 TGATCGACATAGCCTTGGAAGAGACTCCAGTGTCTGGATGGACCTGCTTGAGTAC 1695498 >seq3665 Length=2157650 Score = 136 bits (150), Expect = 6e-26 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||||| |||||| |||| || || || | | Sbjct 994336 TGTACTTGGTGACAGCCTTGGTTCCCTCAGAGACAGCGTGCTTGGCGAGCTCTCCTGGAA 994395 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||| || || ||||| || || ||||||| ||| || | |||||| | Sbjct 994396 GAATCAAACGAACAGCGGTTTGAATTTCGCGGGATGAGATGGTCGATCTCTTGTTGTAGT 994455 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || ||||||| | ||||||| |||| | ||| ||||| |||||||||| Sbjct 994456 GAGCAAGACGAGATGCCTCGGCGGCGATGCGCTCGAAGACGTCATTGACGAACGAGTTCA 994515 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||||||| | ||| |||| || ||| || || ||||||||||| || Sbjct 994516 TGATCGACATAGCCTTGGAAGAGACTCCAGTGTCTGGATGAACCTGCTTGAGTAC 994570 Score = 131 bits (144), Expect = 3e-24 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||||| |||||| |||| || || || | | Sbjct 985229 TGTACTTGGTGACAGCCTTGGTTCCCTCAGAGACAGCGTGCTTGGCGAGCTCTCCTGGAA 985170 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||| || || ||||| || || || |||| ||| || | |||||| | Sbjct 985169 GAATCAAACGAACAGCGGTTTGAATTTCACGGGATGAGATGGTCGATCTCTTGTTGTAGT 985110 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || ||||||| | ||||||| |||| | ||| ||||| |||||||||| Sbjct 985109 GAGCAAGACGAGATGCCTCGGCGGCGATGCGCTCGAAGACGTCATTGACGAACGAGTTCA 985050 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||||||| | ||| |||| || ||| || || ||||||||||| || Sbjct 985049 TGATCGACATAGCCTTGGAAGAGACTCCAGTGTCTGGATGAACCTGCTTGAGTAC 984995 Score = 122 bits (134), Expect = 1e-21 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||||| |||||| |||| || || || | | Sbjct 945661 TGTACTTGGTGACAGCCTTGGTTCCCTCAGAGACAGCGTGCTTGGCGAGCTCTCCTGGAA 945720 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||| || || ||||| || || ||||||| ||| || | |||||| Sbjct 945721 GAATCAAACGAACAGCGGTTTGAATTTCGCGGGATGAGATGGTCGATCTCTTGTTGTAAT 945780 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || ||||||| | | ||||| |||| | ||| ||||| |||||||||| Sbjct 945781 GAGCAAGACGAGATGCCTCGGCGGCAATGCGCTCGAAGACGTCATTGACGAACGAGTTCA 945840 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | ||| |||| || ||| || || ||||||||||| || Sbjct 945841 TGATGGACATAGCCTTGGAAGAGACTCCAGTGTCTGGATGAACCTGCTTGAGTAC 945895 >seq3657 Length=1321725 Score = 136 bits (150), Expect = 6e-26 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| ||||| |||||| |||| || || || | | Sbjct 903607 TGTACTTGGTAACAGCCTTGGTTCCCTCAGAGACAGCGTGCTTGGCGAGCTCTCCTGGAA 903666 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||| || ||||| || || || ||||||| ||| || | |||||| | Sbjct 903667 GAATCAAACGGACGGCCGTTTGAATTTCGCGGGAAGAGATGGTCGATCTCTTGTTGTAGT 903726 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || |||||||| | ||||||| |||| | ||| ||||| |||||||||| Sbjct 903727 GAGCAAGACGAGAGGCCTCGGCGGCGATGCGCTCGAAGACGTCATTGACGAACGAGTTCA 903786 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||||||| | ||| |||| || ||| || || ||||||||||| || Sbjct 903787 TGATCGACATAGCCTTGGAAGAGACTCCAGTGTCTGGATGAACCTGCTTGAGTAC 903841 Score = 127 bits (140), Expect = 3e-23 Identities = 174/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| ||||| |||||| |||| || || || | | Sbjct 915200 TGTACTTGGTAACAGCCTTGGTTCCCTCAGAGACAGCGTGCTTGGCGAGCTCTCCTGGAA 915141 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||| || || || || || || ||||||| ||| || | |||||| | Sbjct 915140 GAATCAAACGGACAGCCGTTTGAATTTCGCGGGAAGAGATGGTCGATCTCTTGTTGTAGT 915081 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || ||||||| | ||||||| |||| | ||| ||||| |||||||||| Sbjct 915080 GAGCAAGACGAGACGCCTCGGCGGCGATGCGCTCGAAGACGTCATTGACGAACGAGTTCA 915021 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| | ||| |||| || ||| || || ||||||||||| || || Sbjct 915020 TGATCGACATAGCCTTGGAAGAGACTCCAGTGTCTGGATGGACCTGCTTGAGTACACGGT 914961 Query 1485710 AAA 1485712 ||| Sbjct 914960 AAA 914958 Score = 105 bits (116), Expect = 1e-16 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 1485484 GCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACG 1485543 ||||| | ||||| ||||| |||||| |||| || || || | | |||| || ||| Sbjct 910536 GCCTTAGATCCCTCAGAGACAGCGTGCTTGGCGAGCTCTCCTGGAAGAATCAAACGGACG 910595 Query 1485544 GCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCG 1485603 || || || || ||||||| ||| || | |||||| | | || || || | Sbjct 910596 GCCGTTTGAATTTCGCGGGAAGAGATGGTCGATCTCTTGTTGTAGTGAGCAAGACGAGAG 910655 Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||||| | | ||||| |||| | ||| ||||| |||||||||||||||||||| | Sbjct 910656 GCCTCGGCGGCAATGCGCTCGAAGACGTCATTGACGAACGAGTTCATGATCGACATAGCC 910715 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| |||| || ||| || || ||||||||||| || Sbjct 910716 TTGGAAGAGACTCCAGTGTCTGGATGGACCTGCTTGAGTAC 910756 >seq3650 Length=1244161 Score = 136 bits (150), Expect = 6e-26 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 |||||||||||||||||||| || || || || |||||| |||| ||||| || | | Sbjct 263938 TACTTGGTGACGGCCTTGGTTCCTTCAGACACAGCGTGCTTGGCGAGTTCTCCTGGAAGA 263997 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 ||||| || || || |||||||| ||||| | ||| || |||||||| | | Sbjct 263998 ATCAGACGAACAGCCGTCTGGATTTCGCGAGAAGAGATGGTCGAACGCTTGTTGTAGTGA 264057 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || || || |||||| | |||| || |||| | |||||||||||||||||||||| Sbjct 264058 GCAAGACGAGAGGCCTCAGCAGCGATACGCTCGAAGACGTCGTTGACAAACGAGTTCATG 264117 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 || ||||| | ||| ||||| || ||| || || || |||||||| || Sbjct 264118 ATGGACATGGCTTTAGAGGAGACTCCAGTGTCTGGATGAACTTGCTTGAGAAC 264170 Score = 102 bits (112), Expect = 1e-15 Identities = 167/237 (70%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAG-TTCGCCGCGC 1485528 |||||||||||||||||||||| || || || || |||||| |||| || ||| ||| | Sbjct 387339 TGTACTTGGTGACGGCCTTGGTTCCTTCAGACACAGCGTGCTTGGCGAGTTTCTCCG-GA 387281 Query 1485529 ATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTG 1485588 | |||||| || || || ||||||| | ||| ||| || |||||||| | Sbjct 387280 AAGATCAGACGGACAGCCCTCTGGATTTTCGGGGAAGAGATGGTTGAACGCTTGTTGTTA 387221 Query 1485589 CGCGCCAGG-CGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | |||||| ||| | | ||| ||| || | || | |||| | |||||||||| Sbjct 387220 GGGGCCAGGACGGGGGCCTTCGCCAGGGATACGCTGGAAGACTTCGTGGCCAAACGAGTT 387161 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| |||| | || | |||||| || |||||||| || |||||||| || Sbjct 387160 CATGAGGGACAGGGCTTGGGAGGAGATCCCAGTTTCGGGGTGAACTTGCTTGAGAAC 387104 >seq3654 Length=1391273 Score = 131 bits (144), Expect = 3e-24 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| || || || ||||||||| |||||| || || | | Sbjct 381015 TGTACTTGGTCACAGCCTTGGTTCCTTCAGAAACGGCGTGCTTGGCCAACTCTCCTGGAA 380956 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| || |||||||| || || ||||||| ||| || ||||||||| | Sbjct 380955 GGATCAAACGGACGGCGGTTTGAATTTCGCGGGAAGAGATGGTTGAGCGCTTGTTGTAGT 380896 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || ||||||| ||||||| |||| | ||||||||| || ||||||| Sbjct 380895 GGGCAAGACGAGAAGCCTCGGCAGCGATGCGTTCGAAGACGTCGTTGACGAAGGAGTTCA 380836 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | || ||||| || ||| ||||| || ||||| | ||| Sbjct 380835 TGATGGACATGGCCTTCGAGGAGACTCCAGTGTCTGGGTGAACTTGCTTCAACAC 380781 Score = 122 bits (134), Expect = 1e-21 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| || || || ||||||||| |||||| || || | | Sbjct 669729 TGTACTTGGTCACAGCCTTGGTTCCTTCAGAAACGGCGTGCTTGGCCAACTCTCCTGGAA 669788 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| || || || || || || ||||||| ||| || ||||||||| | Sbjct 669789 GGATCAAACGGACAGCCGTTTGAATTTCGCGGGAAGAGATGGTTGAGCGCTTGTTGTAGT 669848 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || ||||||| ||||||| |||| | ||||||||| || ||||||| Sbjct 669849 GGGCAAGACGAGAAGCCTCGGCAGCGATGCGTTCGAAGACGTCGTTGACGAAGGAGTTCA 669908 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | || ||||| || ||| ||||| || ||||| | ||| Sbjct 669909 TGATGGACATGGCCTTCGAGGAGACTCCAGTGTCTGGGTGAACTTGCTTCAACAC 669963 >seq3651 Length=1278986 Score = 127 bits (140), Expect = 3e-23 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| || ||||| ||||| || ||||||||| |||| || || || | | Sbjct 355249 TGTACTTGGTGACTGCTTTGGTTCCCTCGGACACGGCGTGCTTGGCGAGCTCTCCTGGAA 355190 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| || || || ||||| || ||||||| ||| || ||||||||| | Sbjct 355189 GGATCAAACGGACAGCCGTCTGAATTTCGCGGGACGAGATGGTTGAGCGCTTGTTGTAGT 355130 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || ||| ||||| | ||||||| |||| | ||| ||||| || ||||||| Sbjct 355129 GAGCAAGACGGGAAGCCTCAGCAGCGATGCGTTCGAAGACGTCATTGACGAATGAGTTCA 355070 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | ||| ||| | || || ||||| || |||||||| || Sbjct 355069 TGATAGACATGGCCTTGGAGGAAACTCCGGTTTCTGGGTGAACTTGCTTGAGAAC 355015 >seq2563 Length=10588 Score = 116 bits (128), Expect = 6e-20 Identities = 143/192 (74%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| || ||||| ||||| || ||||||||| |||| || || || | | Sbjct 296 TGTACTTGGTGACTGCTTTGGTTCCCTCGGACACGGCGTGCTTGGCGAGCTCTCCTGGAA 237 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 ||||| || || || ||||| || ||||||| ||| || |||||||| |||| Sbjct 236 GGATCAAACGGACAGCCGTCTGAATTTCGCGGGACGAGATGGTTGAGCGCTTGTTGTAGT 177 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || ||| ||||| | ||||||| |||| | ||| ||||| || ||||| Sbjct 176 GAGCG--AGACGGGAAGCCTCAGCAGCGATGCGTTCGA-GACGTCATTGACGAATGAGTT 120 Query 1485648 CATGATCGACAT 1485659 |||||| ||||| Sbjct 119 CATGATGGACAT 108 >seq1985 Length=6629 Score = 114 bits (126), Expect = 2e-19 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || || || |||||| |||| ||||| || | | Sbjct 183 TGTACTTGGTGACAGCCTTGGTTCCTTCAGACACAGCGTGCTTGGCGAGTTCTCCTGGAA 124 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| || || || |||||||| ||||| | ||| || |||||||| | Sbjct 123 GAATCAGACGGACAGCCGTCTGGATTTCGCGAGAAGAGATGGTCGAACGCTTGTTGTAGT 64 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || |||||| | |||| || |||| | |||||||||||||||||||| Sbjct 63 GAGCAAGACGAGAGGCCTCAGCAGCGATACGCTCGAAGACGTCGTTGACAAACGAGTTCA 4 Query 1485650 TGA 1485652 ||| Sbjct 3 TGA 1 >seq3649 Length=974952 Score = 104 bits (114), Expect = 4e-16 Identities = 216/315 (69%), Gaps = 10/315 (3%) Strand=Plus/Minus Query 793907 ATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 793966 ||||||| || ||| ||| || ||||||||||| || |||| |||||| |||||| Sbjct 67977 ATACTCGGAGACACGCTTCTCAAAGAAGTTGGTCTTTCCATCGATCGAGATGTTCTCCAT 67918 Query 793967 CCACGGGAACGGGTTGGCCGTCAGGTAGT---GCTTCTCGCACCCGAGCGACGCAAGCAG 794023 | ||| || || | ||| | || |||| ||||| ||||| |||||||| Sbjct 67917 GAAGTCGAATGGATT---CTTCACATTGTACAGCTTGTCGCATCCGAGTTCCGCAAGCAA 67861 Query 794024 GCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGC-GTTCATGCCGATGAGCG 794082 | | ||||||||||| || ||||| || |||| | | || | ||||||||| || | Sbjct 67860 GTGATCGGCGACGAACTCGATGTATTGAGACATCA-GACGACAGTTCATGCCAATCATGT 67802 Query 794083 CCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142 | || || || | ||| | | ||||||| ||||| |||||| || |||| |||| Sbjct 67801 CAACTGGGAGTGCCTCTGTCAAGAACTCTTGTTCGATGCAGACGGCGTCCCTGATAATCT 67742 Query 794143 GCCTGGGCACG-TCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAG 794201 | | ||| || | |||||| ||||||| |||||| ||||| || ||| Sbjct 67741 -CGAAGATACGCTCCTGTGTTAGCTTGTTCTGAAGCATCGAGTAGAGAAGGCAAGCGAAG 67683 Query 794202 TCGCAATGCAGACCT 794216 |||| ||| || ||| Sbjct 67682 TCGCGATGAAGTCCT 67668 Score = 104 bits (114), Expect = 4e-16 Identities = 216/315 (69%), Gaps = 10/315 (3%) Strand=Plus/Plus Query 793907 ATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 793966 ||||||| || ||| |||||| ||||||||||| || || | |||||| |||||| Sbjct 92534 ATACTCGGAGACACGCTTCTCGAAGAAGTTGGTCTTTCCATCTATCGAGATGTTCTCCAT 92593 Query 793967 CCACGGGAACGGGTTGGCCGTCAGGTAGT---GCTTCTCGCACCCGAGCGACGCAAGCAG 794023 | ||| || || | ||| | || |||| ||||| |||||| |||||||| Sbjct 92594 GAAGTCGAATGGATT---CTTCACATTGTACAGCTTGTCGCATCCGAGCTCCGCAAGCAA 92650 Query 794024 GCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGC-GTTCATGCCGATGAGCG 794082 | | ||||||||||| || ||||| || |||| | | || | ||||||||| || | Sbjct 92651 GTGATCGGCGACGAACTCGATGTATTGAGACATCA-GACGACAGTTCATGCCAATCATGT 92709 Query 794083 CCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142 | || || || | ||| | | ||||| | |||||| |||||| || |||| |||| Sbjct 92710 CGACTGGAAGTGCCTCTGTCAAGAACTCCTGCTCGATGCAGACGGCGTCCTTGATAATCT 92769 Query 794143 GCCTGGGCACG-TCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAG 794201 | | ||| || | |||||| ||||||| |||||| ||||| || ||| Sbjct 92770 -CGAAGATACGCTCCTGTGTTAGCTTGTTCTGAAGCATCGAGTAGAGAAGGCAAGCGAAG 92828 Query 794202 TCGCAATGCAGACCT 794216 || | ||| || ||| Sbjct 92829 TCACGATGGAGTCCT 92843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915856005361130