Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_023690.1 Length=110569 Score E Sequences producing significant alignments: (Bits) Value seq2269 89.7 4e-13 >seq2269 Length=8036 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 50725 TTCCCCCGGATCACCCCGCACGACCTCCGGCACACCTGC-GCCTCGCTGGCCATCTCCTC 50783 ||||| |||||||| || || ||||||||||||| |||| || || || ||| | || | Sbjct 7812 TTCCCGCGGATCACACCTCATGACCTCCGGCACA-CTGCAGCGTCCCTTGCCGTTGCCGC 7870 Query 50784 CGGCGCCAACGTCAAGGCGGTCCAGAACCTTCTGGGACACGCCACCGCGGTGATGACTTT 50843 |||||| ||||| |||||||||||| | || || ||| || | |||| |||||| | Sbjct 7871 CGGCGCGAACGTGAAGGCGGTCCAGCGGATGCTCGGGCACACCTCAGCGGCAATGACTCT 7930 Query 50844 GGACCTCTACG 50854 ||| | |||| Sbjct 7931 CGACGTGTACG 7941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353680179841100