Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_023714.1 Length=153882 Score E Sequences producing significant alignments: (Bits) Value seq802 96.9 3e-15 >seq802 Length=2299 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 114283 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 114342 ||||| || |||||||| | || || || ||||| |||||| |||| |||||||| Sbjct 977 GGCCCCGGTCGTGGCTCGGGCGCGGGATCCATGGTCGCCTACGCCATGCGCATCACCGAT 1036 Query 114343 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGC--CCCG 114400 |||| ||| | || ||| || || |||||||| ||| ||||||| || ||| | || Sbjct 1037 CTCGATCCGCTGCAGCACGGACTCATCTTCGAGCGATTCCTCAACCCCGATCGCGTCTCG 1096 Query 114401 ACTTCCCCGACATCGACGTCGACTTC 114426 | | |||||| |||||||||||||| Sbjct 1097 A--TGCCCGACTTCGACGTCGACTTC 1120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492271815994400