Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3630 390 3e-103 seq3658 289 9e-73 seq3636 199 1e-45 seq3663 158 4e-33 seq3664 154 4e-32 seq3667 129 2e-24 seq3618 125 2e-23 seq2032 125 2e-23 seq3642 100 9e-16 seq3660 91.5 4e-13 >seq3630 Length=571110 Score = 390 bits (432), Expect = 3e-103 Identities = 981/1487 (66%), Gaps = 79/1487 (5%) Strand=Plus/Plus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || ||||||||||| |||| |||| ||||| |||||||| || ||||| || Sbjct 457169 GTCGAGATAATTGCAAACTCAGAAGGAAACAAGACAACACCATCATATGTCGCATTCACT 457228 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || || || || |||| ||| | |||||| ||||||| ||| ||||||| | || Sbjct 457229 GATACAGAACGATTGGTTGGAGATGCAGCAAAAGATCAAGCAGCTCGTAATCCAGAGAAC 457288 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAA 349435 || || || ||||| || ||| | ||||| ||| |||| ||| || ||| ||| Sbjct 457289 ACTGTATTCGATGCAAAACGATTGATTGGAAGACGTTTCGATGAG---TCAACAGTTCAA 457345 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || || ||||||| || ||| || |||| | || |||||| | ||| Sbjct 457346 TCAGACTGCAAACATTGGCCATTTGGAGTAAAAGGAAAACAAGGG---AAACCAGTGATT 457402 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT- 349554 || |||||| ||||| || || ||||| || |||||||| ||| ||||||| Sbjct 457403 GAAGTTGAAATGAAAGGAGAGAAACGGCAATTCAATCCAGAAGAAATCTCAGCAATGGTA 457462 Query 349555 -TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 || || || |||||||||| || ||| ||||| | || | | ||| ||||| | Sbjct 457463 CTTCAG--AAGATGAAGGAAACGGCGGAAACATATGTTGGACATGCGATAAAAGATGCAG 457520 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | ||||||||||| || ||||| ||||| ||| | |||||||||||||| | | Sbjct 457521 TGATTACTGTACCTGCATATTTCAATGACAGTCAGAGACAAGCAACAAAAGATGCAGCAA 457580 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 ||||| || || |||| | |||| || |||||||| ||||| || || |||| | Sbjct 457581 CAATTGCTGGATTGAATGCAATTCGAATAATCAATGAACCAACTGCAGCTGCTCTTGCTT 457640 Query 349734 ATGGGCTTGATAAAATGAGTGA-CCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 |||| | ||| ||| || | | | |||| || ||| | | || || ||| | || || Sbjct 457641 ATGGATTGGAT-AAAGGAATAAGCGAAGAGAAGAATGTATTGATATTCGATCTTGGAGGA 457699 Query 349793 GGTACTTTTGATGTATCACTACTAACACT---TGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 |||||||||||||| ||| | || | | ||||| ||| || ||||| ||| || Sbjct 457700 GGTACTTTTGATGTTTCAATTCTTTCCATTTCTGAAGGATCAATATTCGAAGTGAAATCA 457759 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || ||||||||||| |||||||| ||||||||||| ||| | | | || || ||| Sbjct 457760 ACAGCTGGTGATACTCATCTTGGAGGAGAAGATTTCGATCAGAGAATGCTTCAACACTTT 457819 Query 349910 GTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969 | || ||||| ||| | | || | |||||| | ||||| | || || || Sbjct 457820 ATGAATGAATTCAAGAGAAAGACTGGCAAAGATATTTCACCGAATCCACGTGCCATTCGA 457879 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || ||||||| |||||||| || || | | | || | | || || || | Sbjct 457880 CGTCTTCGAACTGCATGTGAACGAGCCAAAAGGACACTTTCGAGTTCATCCGAAGCCACA 457939 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 || ||| ||||||| ||| || || | ||||| | || || || |||||||| Sbjct 457940 ATCGAAGTTGATTCACTTTTCGAAGGAATCGATTTGTGCTCGAAAATAACTCGTGCTCGA 457999 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 ||||| ||||| ||| ||||| || | || | || || || || |||| | Sbjct 458000 TTTGAGGAATTGTGTGCTGATCTATTCCGTAAGACTCTTGAACCGGTTGAGAAAGCTCTT 458059 Query 350150 AAAGATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207 |||||| ||| || | ||||| ||||||||||||| ||||| |||||||| || | Sbjct 458060 CGAGATGCGAAA--CTCGACAAATCGAAGATTGATGAAGTCGTTTTGGTTGGTGGATCAA 458117 Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAG--------- 350258 | ||| |||| ||| |||| || | || || ||||| ||||| || | Sbjct 458118 CTCGTGTTCCGAAAATTCAGAAGATGCTCAAAGACTTTTTCAATGGAAAGGTAAGTGTTA 458177 Query 350259 -------AAC-------------CTTCTA----------------GA--TCAATT----A 350276 ||| ||||| || | |||| | Sbjct 458178 TTATCTCAACTCAATTTCATTTTATTCTAATTTTTTGTTTTTCAGGAATTGAATTGTTCA 458237 Query 350277 ATC----CAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 ||| |||| ||||| ||||||| ||| ||||| ||||| ||| || | | |||||| Sbjct 458238 ATCAATCCAGACGAAGCAGTTGCATTTGGAGCTGCAGTTCAAGCAGCTGTACTTTCTGGA 458297 Query 350333 AATAAGAGTTCTAA-AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391 ||| | || || |||| | ||| ||||||| | ||||| ||||| | ||||| Sbjct 458298 GTGAAG-GATCAAACAATTAAAGATGTATTACTGGTTGATGTTGCTCCATTGAGTCTTGG 458356 Query 350392 ATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTAC 350451 | | || || |||||| || ||||| | ||| | |||| | | | || || Sbjct 458357 AATTGAGACAGCTGGTGGTGTGATGACCAACTTAATTGATCGAAACACTCGAATTCCAAC 458416 Query 350452 AAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGT 350511 ||| ||| |||| || | |||| ||| |||||||| |||| || |||| ||||| Sbjct 458417 GAAAGCGTCGAAAACATTCACAACATATGCTGATAATCAACCAGGAGTTTCAATCCAAGT 458476 Query 350512 ATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAG 350571 | ||||| |||||||| ||| |||||| | || ||| ||| || Sbjct 458477 TTACGAAGGAGAACGTGCCATGACTCGTGATAATCACCGTCTCGGAACATTCGAACTTTC 458536 Query 350572 TGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTC 350631 || |||||| || || | || |||||||| ||||||||| |||| ||||| ||| | Sbjct 458537 TGGAATTCCTCCTGCTCCACGTGGTGTTCCTCAAATTGAAGTCACTTTTGATATCGATGC 458596 Query 350632 AAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAA 350678 |||||| || || ||||| | || | || ||||||| ||| |||| Sbjct 458597 AAATGGAATATTGAATGTGTCGGCTGAGGATAAATCAACTGGAAAAA 458643 Score = 187 bits (206), Expect = 8e-42 Identities = 327/472 (69%), Gaps = 13/472 (3%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || ||||||||||| |||| |||| ||||| |||||||| |||||||| || Sbjct 456320 GTCGAGATAATTGCAAACTCAGAAGGAAACAAGACAACACCATCATATGTTGCATTCACT 456261 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || || || || |||| ||| | |||||| ||||||| ||| ||||||| | || Sbjct 456260 GATACAGAACGATTGGTTGGAGATGCGGCAAAAGATCAAGCAGCTCGTAATCCAGAGAAC 456201 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAA 349435 || || || ||||| || ||| | ||||| ||| |||| ||| || ||| ||| Sbjct 456200 ACTGTATTCGATGCAAAACGATTGATTGGAAGACGTTTCGATGAG---TCAACAGTTCAA 456144 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || || ||||||| || ||| || |||| | || |||||| | ||| Sbjct 456143 TCAGACTGCAAACATTGGCCATTTGGAGTAAAAGGAAAACAAGGG---AAACCAGTGATT 456087 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT- 349554 || |||||| ||||| || || ||||| || |||||||| ||| ||||||| Sbjct 456086 GAAGTTGAAATGAAAGGAGAGAAACGGCAATTCAATCCAGAAGAAATCTCAGCAATGGTA 456027 Query 349555 -TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 || || || |||||||||| || ||| ||||| | || | | ||| ||||| | Sbjct 456026 CTTCAG--AAGATGAAGGAAACGGCGGAAACATATGTTGGACATGCGATAAAAGATGCAG 455969 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | ||||||||||| || ||||| ||||| ||| | |||||||||||||| | | Sbjct 455968 TGATTACTGTACCTGCATATTTCAATGACAGTCAGAGACAAGCAACAAAAGATGCAGCAA 455909 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGC 349725 ||||| || | |||| | |||| || |||||||| ||||| || || Sbjct 455908 CAATTGCTGGATGGAATGCAATTCGAATAATCAATGAACCAACTGCAGCTGC 455857 Score = 172 bits (190), Expect = 2e-37 Identities = 331/483 (69%), Gaps = 5/483 (1%) Strand=Plus/Minus Query 183312 TTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCG 183371 || ||||| ||||| ||| ||||| | |||||||| |||| | |||||| ||||| Sbjct 458166 TTTCCATTGAAAAAGTCTTTGAGCATCTTCTGAATTTTCGGAACACGAGTTGATCCACCA 458107 Query 183372 ACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCA 183431 || || || |||||||| || || ||| | || | |||| | | |||| ||| Sbjct 458106 ACCAAAACGACTTCATCAATCTTCGATTTGTCGAGTTTCGCATCTCGAAGAGCTTTCTCA 458047 Query 183432 ACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTT 183491 || || || | ||| || | |||| ||| ||| || || || |||| || | |||| Sbjct 458046 ACCGGTTCAAGAGTCTTACGGAATAGATCAGCACACAATTCCTCAAATCGAGCACGAGTT 457987 Query 183492 AAAGATGaaaaaaaGTCAATACCATTATATAAG-GAATCAATTTCAATCGATGTTTGTGT 183550 | || | || || || || || | ||| ||||||| ||| || | | || | Sbjct 457986 ATTTTCGAGCACAAATCGATTCC-TTCGAAAAGTGAATCAACTTCGATTGTGGCTTCGGA 457928 Query 183551 AGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCT 183610 || || | ||| ||||| |||||||||||||| |||| || || || | | | Sbjct 457927 TGAACTCGAAAGTGTCCTTTTGGCTCGTTCACATGCAGTTCGAAGACGTCGAATGGCACG 457868 Query 183611 TGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAG 183670 |||||| || |||||||| | ||||| || |||||| | ||||| |||||||| Sbjct 457867 TGGATTCGGTGAAATATCTTTGCCAGTCTTTCTCTTGAATTCATTCATAAAGTGTTGAAG 457808 Query 183671 TAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTC 183730 | ||| ||| |||||||| || || | ||| ||||| ||||| || | ||| ||||| Sbjct 457807 CATTCTCTGATCGAAATCTTCTCCTCCAAGATGAGTATCACCAGCTGTTGATTTCACTTC 457748 Query 183731 AAATATTCCGTCTTCA-ATATTTAA--AATTGATACATCAAATGTACCACCACCCAAATC 183787 |||||| ||||| | || || |||||| |||||||| ||||| || || | ||| Sbjct 457747 GAATATTGATCCTTCAGAAATGGAAAGAATTGAAACATCAAAAGTACCTCCTCCAAGATC 457688 Query 183788 AAA 183790 || Sbjct 457687 GAA 457685 >seq3658 Length=1447888 Score = 289 bits (320), Expect = 9e-73 Identities = 588/866 (68%), Gaps = 18/866 (2%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || ||||||||||| |||| |||| ||||| |||||||| || ||||| || Sbjct 1289605 GTCGAGATAATTGCAAACTCAGAAGGAAACAAGACAACACCATCATATGTCGCATTCACT 1289546 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || || || || |||| ||| | |||||| ||||||| ||| ||||||| | || Sbjct 1289545 GATACAGAACGATTGGTTGGAGATGCAGCAAAAGATCAAGCAGCTCGTAATCCAGAGAAC 1289486 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAA 349435 || || || ||||| || ||| | ||||| ||| ||||| ||| || ||| ||| Sbjct 1289485 ACTGTATTCGATGCAAAACGATTGATTGGAAGACGTTTTGATGAG---TCAACAGTCCAA 1289429 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || || ||||||| || ||| || |||| | || |||||| | ||| Sbjct 1289428 TCAGACTGCAAACATTGGCCATTTGGAGTAAAAGGAAAACAAGGG---AAACCAGTGATT 1289372 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT- 349554 || |||||| ||||| || || ||||| || |||||||| ||| ||||||| Sbjct 1289371 GAAGTTGAAATGAAAGGAGAGAAACGGCAATTCAATCCAGAAGAAATCTCAGCAATGGTA 1289312 Query 349555 -TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 || || || |||||||||| || ||| ||||| | || | | ||| ||||| | Sbjct 1289311 CTTCAG--AAGATGAAGGAAACGGCGGAAACATATGTTGGACATGCGATAAAAGATGCAG 1289254 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | ||||||||||| || ||||| ||||| ||| | |||||||||||||| | | Sbjct 1289253 TGATTACTGTACCTGCATATTTCAATGACAGTCAGAGACAAGCAACAAAAGATGCAGCAA 1289194 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 ||||| || || |||| | |||| || |||||||| ||||| || || |||| | Sbjct 1289193 CAATTGCTGGATTGAATGCAATTCGAATAATCAATGAACCAACTGCAGCTGCTCTTGCTT 1289134 Query 349734 ATGGGCTTGATAAAATGAGTGACC-AAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 |||| | |||||| || | | | |||| || ||| | | || || ||| | || || Sbjct 1289133 ATGGATTGGATAAAG-GAATAAGCGAAGAGAAGAATGTATTGATATTCGATCTTGGAGGA 1289075 Query 349793 GGTACTTTTGATGTATCACTACTAACACT---TGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 |||||||||||||| ||| | || | | ||||| ||| || ||||| ||| || Sbjct 1289074 GGTACTTTTGATGTTTCAATTCTTTCCATTTCTGAAGGATCAATATTCGAAGTGAAATCA 1289015 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || ||||||||||| ||||| || ||||||||||| ||| | | | || || ||| Sbjct 1289014 ACAGCTGGTGATACTCATCTCGGAGGAGAAGATTTCGATCAGAGAATGCTTCAACACTTT 1288955 Query 349910 GTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969 | || ||||| ||| | | || | |||||| | ||||| | || || || Sbjct 1288954 ATGAATGAATTCAAGAGAAAGACTGGCAAAGATATTTCACCGAATCCACGTGCCATTCGA 1288895 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || ||||||| | |||||| || || | | | || | | || || || | Sbjct 1288894 CGTCTTCGAACTGCATTTGAACGAGCCAAAAGGACACTTTCGAGTTCATCCGAAGCCACA 1288835 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 || ||| ||||||| ||| || | | ||||| | || || || |||||||| Sbjct 1288834 ATCGAAGTTGATTCACTTTTCGAAAGAATTGATTTGTGCTCGAAAATAACTCGTGCTCGA 1288775 Query 350090 TTTGAAGAATTATGTATGGATCTTTT 350115 ||||| ||||| ||| ||||| || Sbjct 1288774 TTTGAGGAATTGTGTGCTGATCTATT 1288749 Score = 170 bits (188), Expect = 6e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| |||||||| || ||||| || || || || || || || || || || |||||| Sbjct 41759 AGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTGCGTCCATCT 41818 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || ||||| |||||||| ||||| || | |||||||| || ||||||||||| || || Sbjct 41819 TCGAGTTGCTTTCCAGCGAAGATGAGTCTCTGCTGATCTGGTGGAATTCCTTCCTTGTCT 41878 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| ||||| || ||||| ||||| | ||||| | ||| || ||||| || | ||| Sbjct 41879 TGAATCTTAGCCTTCACATTTTCAATGGTGTCAGAGGCTTCGACCTCAAGAGTGATGGTC 41938 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| || || || || || |||||||| Sbjct 41939 TTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 41970 Score = 158 bits (174), Expect = 4e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | ||||| ||||||||||| ||||| || || ||||||| Sbjct 42465 TTTGCATACCTCCACGGAGACGGAGAACGAGATGAAGAGTGGACTCCTTCTGGATATTAT 42524 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | |||| || |||||||| || ||||| || ||||| || | ||||||| Sbjct 42525 AGTCCGAGAGAGTTCTTCCGTCTTCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGAT 42584 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || ||||| || || || || || ||||| ||||| ||||| | ||||| | Sbjct 42585 CTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTCTCAATGGTGTCAGAAG 42644 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || || || | |||||||| || || || || || || || ||||| Sbjct 42645 CTTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGCGTCTTCACGAAGATTTGCAT 42699 Score = 156 bits (172), Expect = 1e-32 Identities = 176/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | ||||| ||||||||||| ||||| ||||| ||||| | Sbjct 42693 TTTGCATACCTCCACGAAGACGGAGAACGAGATGAAGAGTGGACTCCTTTTGGATATTGT 42752 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || ||||| || ||||| ||||| || || || || | ||||||| Sbjct 42753 AGTCCGACAAGGTCCGTCCATCCTCGAGTTGCTTTCCGGCGAAAATGAGTCTCTGCTGAT 42812 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || ||||| ||||| || || || || || || || || || || | ||| || | Sbjct 42813 CTGGTGGGATTCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTATCGGAAG 42872 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||| || || || |||| |||||||| || || || || || || ||||||||| Sbjct 42873 CTTCGACCTCGAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCATT 42928 Score = 152 bits (168), Expect = 2e-31 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | ||||| | |||||||||||||| || || || || || || Sbjct 41238 CATACCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 41297 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | ||| || |||||||| ||||| |||||||| ||||| || | |||||| || || Sbjct 41298 AGAGAGTGTACGTCCATCTTCGAGTTGCTTTCCAGCGAAGATAAGTCTTTGCTGGTCTGG 41357 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| ||||| || || || || ||||| ||||| ||||| | || || | || Sbjct 41358 TGGGATTCCCTCTTTGTCTTGGATCTTGGCTTTGACATTTTCAATGGTGTCGGAAGCCTC 41417 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | || | ||||||||||| || || || || || || |||||| Sbjct 41418 CACCTCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCATT 41469 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | || || || | ||| || || |||||||| || || || || || Sbjct 42241 CATGCCTCCACGGAGTCGGAGGACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 42300 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| |||||||| |||||||||||||| || | ||||||||| || Sbjct 42301 GGAAAGAGTACGTCCATCCTCAAGTTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGG 42360 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| |||||||| || || || || || || || || || ||||| | ||||| | ||| Sbjct 42361 AGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCAATGGTGTCAGAAGCTTC 42420 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | |||||||| || || || || || || || ||||| Sbjct 42421 AACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 42471 Score = 150 bits (166), Expect = 5e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| | || || ||||| || ||||| ||||| ||||| || || || || ||||| Sbjct 43494 AGAACCAAGTGGAGTGTAGATTCCTTTTGGATATTGTAATCGGACAAAGTACGTCCATCC 43553 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 |||||||| |||||||| ||||| || | ||||||||| || ||||||||||| || || Sbjct 43554 TCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCT 43613 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | || || | |||||| || || || | ||| Sbjct 43614 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCCGAGGCTTCAACCTCGAGGGTGATGGTC 43673 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || || || || || || || |||||| Sbjct 43674 TTTCCAGTGAGGGTCTTCACGAAGATTTGCATT 43706 Score = 129 bits (142), Expect = 2e-24 Identities = 171/237 (72%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 140504 TTACATA---CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATT 140560 ||||||| || ||||| | | ||||| ||||||||||| ||||| ||||| || || Sbjct 41004 TTACATATCTCCTCCACGAAGACGAAGAACGAGATGAAGAGTTGACTCCTTTTGGATGTT 41063 Query 140561 ATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTG 140620 || || || || || || ||||| || || || ||||| || || || | |||||| || Sbjct 41064 GTAGTCCGACAAGGTCCGTCCATCCTCGAGCTGCTTTCCGGCGAAAATCAAACGTTGTTG 41123 Query 140621 ATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGA 140680 || || || || ||||| || || || || || || || || || || || | ||||| Sbjct 41124 GTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCAGA 41183 Query 140681 TGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||| || || || || | |||||||| || || || || || || |||||||| Sbjct 41184 GGCTTCGACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 41240 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| ||||||||||| ||||| || || ||||| || || || | |||| || ||| Sbjct 43722 AGAACGAGATGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTTCTTCCGTCT 43781 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 ||||| || ||||| || ||||| || | |||||||| || || ||||| ||||| || Sbjct 43782 TCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGATCTGGTGGGATTCCCTCTTTGTCT 43841 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || ||||| ||||| ||||| | || || | || || || | || | || Sbjct 43842 TGGATCTTGGCTTTGACATTCTCAATGGTGTCGGAAGCCTCCACCTCCAAGGTGATGGTT 43901 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || ||||| Sbjct 43902 TTTCCAGTCAACGTTTTCACGAAGATTTGCAT 43933 Score = 123 bits (136), Expect = 8e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||||||||| || | |||||||| ||||| |||||||| || || |||||||| Sbjct 42101 TTACCAGCAAAGATGAGTCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTG 42160 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| || || | ||||| | ||| || || ||||| | ||||||||||| Sbjct 42161 GCCTTCACATTCTCGATGGTGTCAGAGGCTTCGACCTCGAGTGTGATGGTCTTTCCGGTG 42220 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || ||||||||||| Sbjct 42221 AGCGTTTTCACGAAAATCTGCAT 42243 >seq3636 Length=634842 Score = 199 bits (220), Expect = 1e-45 Identities = 336/483 (70%), Gaps = 5/483 (1%) Strand=Plus/Plus Query 183312 TTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCG 183371 || ||||| ||||| || ||||| || ||||| || |||| ||| || ||||| ||| Sbjct 358339 TTTCCATTGAAAAAATCCTTAAGCAATTTCTGAATCTTCGGAACTCTCGTGGAACCTCCG 358398 Query 183372 ACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCA 183431 || || || |||||||| || | | ||| || | || |||| | || | |||||| Sbjct 358399 ACCAACACAACTTCATCAATGTGTCCCTTATCTATCTTTGCATCTCTCAATGCCTTTTCA 358458 Query 183432 ACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTT 183491 || || |||| || |||| || ||||| ||| | ||||| |||| || | || Sbjct 358459 ACGGGCTCCAATGTCTTTCGGAACAAATCAGCACAAAGTTCTTCGAATCGAGCACGTGTG 358518 Query 183492 AAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTA 183551 | ||| | |||||| | |||| | | |||||||| | ||| | | | | ||| Sbjct 358519 ATTTTGGAATAGAAGTCAGTTCCATCAAACAAGGAATCCACTTCTACAGTAGCCTCGGTA 358578 Query 183552 GATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTT 183611 || || |||||||| || || |||||||| ||||||| || || || | | | | Sbjct 358579 GAGCTGGACAATGTTCTCTTGGCACGTTCACAAGCTGTTCGAAGGCGGCGAATAGCACGT 358638 Query 183612 GGATTATCTGTAATATCTTGTTTATGTTTTCT-TTTAAATTCAGTAATAAAATGTTGAAG 183670 ||||| | ||| |||| || |||||| ||| || ||| | ||||||||||| || Sbjct 358639 GGATTCGGAGAAATGTCTT-TTCCGGTTTTCCGTTTGAACTCATTCATAAAATGTTGGAG 358697 Query 183671 TAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTC 183730 | ||| | || ||||||||||| || | ||| ||||| || || |||| | | ||||| Sbjct 358698 CATTCTGGAGTCGAAATCTTCACCTCCGAGATGAGTATCTCCGGCGGTAGATCTCACTTC 358757 Query 183731 AAATAT---TCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATC 183787 || || ||| || | || || |||||||||||| ||||||||||| |||||||| Sbjct 358758 GAAAATGGATCCTTCAGCGATCGATAGAATTGATACATCGAATGTACCACCTCCCAAATC 358817 Query 183788 AAA 183790 || Sbjct 358818 GAA 358820 Score = 197 bits (218), Expect = 4e-45 Identities = 443/658 (67%), Gaps = 13/658 (2%) Strand=Plus/Minus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 |||||||| ||||||||||| ||||| || ||||| |||||| || || |||||| Sbjct 358991 GATGCTGTGATTACTGTACCTGCCTACTTCAATGACAGTCAGCGTCAAGCTACCAAAGAT 358932 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 |||| | |||||| || | |||| | | | || || |||||||| ||||| || || Sbjct 358931 GCTGCAACCATTGCTGGTCTCAATGCTATTCGTATCATCAATGAACCAACTGCAGCTGCT 358872 Query 349727 ATTGCATATGGGCTTGATAA---AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGAT 349783 | || || || | || || ||| | || | || ||||| || | || || ||| Sbjct 358871 CTCGCTTACGGATTGGACAAGGGAATCAATG---AGGAGAAAAACGTTTTGATCTTCGAT 358815 Query 349784 TTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAA 349840 || || |||||||| || ||||||||| | ||| | | | || ||| ||||| ||| Sbjct 358814 TTGGGAGGTGGTACATTCGATGTATCAATTCTATCGATCGCTGAAGGATCCATTTTCGAA 358755 Query 349841 GTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTT 349900 || | | | || || || ||||| ||||| || || |||||||| || | | | Sbjct 358754 GTGAGATCTACCGCCGGAGATACTCATCTCGGAGGTGAAGATTTCGACTCCAGAATGCTC 358695 Query 349901 TCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGA 349960 |||||| | || || || || || || | || || ||| ||||| | Sbjct 358694 CAACATTTTATGAATGAGTTCAAACGGAAAACCGGAAAAGACATTTCTCCGAATCCACGT 358635 Query 349961 GCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTAT-CATCTACTAC 350019 || || || ||||| |||| || ||||||||||| ||| | | || | || || |||| Sbjct 358634 GCTATTCGCCGCCTTCGAACAGCTTGTGAACGTGCCAAGAGAACATTGTCCAGCT-CTAC 358576 Query 350020 CCAAACCTCTATTGAAATTGATTCTCTTG-CTGATGGCAAAGATTTCTTTTCATCTATTA 350078 | | | || | ||| | ||||| |||| |||||| | || |||| ||| || | Sbjct 358575 CGAGGCTACTGTAGAAGTGGATTC-CTTGTTTGATGGAACTGACTTCTATTCCAAAATCA 358517 Query 350079 CACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGG 350138 |||||||||| || |||||| | ||| ||| | || || ||| |||| || || | Sbjct 358516 CACGTGCTCGATTCGAAGAACTTTGTGCTGATTTGTTCCGAAAGACATTGGAGCCCGTTG 358457 Query 350139 AAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTG 350198 |||| | ||| | ||||||||| || || || ||||||||||| || || || | Sbjct 358456 AAAAGGCATTGAGAGATGCAAAGATAGATAAGGGACACATTGATGAAGTTGTGTTGGTCG 358397 Query 350199 GTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAA 350256 | ||||| || | |||| || |||| | || || || ||||| ||||| || Sbjct 358396 GAGGTTCCACGAGAGTTCCGAAGATTCAGAAATTGCTTAAGGATTTTTTCAATGGAAA 358339 Score = 134 bits (148), Expect = 4e-26 Identities = 218/313 (70%), Gaps = 3/313 (1%) Strand=Plus/Minus Query 349281 AAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTG 349340 ||||||||| || || || || ||||| ||||| || || || ||| | | |||||| Sbjct 359389 AAGGTAACAAGACCACACCTTCCTACGTGGCATTCACAGATACCGAGAGACTTGTTGGTG 359330 Query 349341 ATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGAC 349400 || | || ||| ||||||| ||| ||||||| |||| || || || ||||| ||||| | Sbjct 359329 ATGCCGCCAAAGATCAAGCCGCTCGTAATCCAGAAAACACAGTCTTCGATGCAAAGCGTC 359270 Query 349401 TTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTA 349460 ||||||| ||| | ||| || || || ||||| ||| | || |||| || ||| Sbjct 359269 TTATTGGAAGACGCTTTGACGAGGAAACTGTTCAATCGGATATCAAGCATTGGCCATTTG 359210 Query 349461 CTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAA 349520 | || | ||| | || |||||| || |||| ||||| ||||| || ||| Sbjct 359209 CCGTCAAAGCGAAACAAGGA---AAACCAGTTGTTGAAGTTGAGGTCAAAGGAGAGAAAA 359153 Query 349521 AACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTG 349580 | | || | |||||||| ||| ||||||| | ||||||||||||| || | Sbjct 359152 GAGAGTTCAACGCGGAAGAAATCTCAGCAATGGTGCTCCAGAAAATGAAGGAAACCGCGG 359093 Query 349581 AAGCATATTTAGG 349593 | |||||||||| Sbjct 359092 AGACATATTTAGG 359080 >seq3663 Length=2118579 Score = 158 bits (174), Expect = 4e-33 Identities = 282/409 (69%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329 ||||| ||||| ||||||||||| |||| ||| |||||||| || ||| || | | ||| Sbjct 362591 TCAATAAATCCGGATGAAGCTGTCGCATTTGGAGCTGCTGTCCAAGCAGCTGTACTTTCT 362532 Query 350330 GGA-AATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCT 350388 ||| |||| | | ||| | ||| |||| || | ||||| | ||| | || Sbjct 362531 GGAGTCAAAGACGAC-ACAATCAAGGATGTATTGCTTGTCGATGTTGCACCATTGAGTCT 362473 Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448 |||| | |||||| |||| | ||| |||||| | ||||| |||||||| || | || Sbjct 362472 TGGAATTGAAACTGCTGGAGGAGTTATGACTAGTATTATTGATAGAAATACCACAATTCC 362413 Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508 |||||| || ||||||| | |||| | | || ||||| || | || ||||| Sbjct 362412 AACAAAAGCTTCGAAAACTTTCACCACATATTCTGACAATCAAGCATCAGTTTTCATTCA 362353 Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568 ||| | |||||| |||||||| ||| |||||| | ||||| ||| || Sbjct 362352 AGTCTATGAAGGAGAACGTGCAATGACTCGTGATAATCACCGTCTTGGTACATTCGAACT 362293 Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628 || |||||| || || | |||||||| || ||||||||| |||||||||| || Sbjct 362292 CTCTGGAATTCCTCCTGCTCCACGTGGAGTTCCACAAATTGAAGTCACTTTCGATATCGA 362233 Query 350629 TTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAA 350677 | | ||||| ||| | || || |||| | || ||||||| || ||| Sbjct 362232 TGCGAATGGAATTCTGAACGTATCCGCTGAAGACAAATCAACCGGAAAA 362184 Score = 152 bits (168), Expect = 2e-31 Identities = 268/386 (69%), Gaps = 7/386 (2%) Strand=Plus/Minus Query 349281 AAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTG 349340 |||| |||| || || ||||| || || ||||| || || ||||| || | |||| | Sbjct 363412 AAGGAAACAAGACGACACCATCTTATGTGGCATTCACTGACACTGAACGACTCGTTGGAG 363353 Query 349341 ATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGAC 349400 ||||||||||| |||||||||| ||||| | ||||||||||| ||||| || |||| Sbjct 363352 ATTCTGCAAAAGATCAAGCTGCACGGAATCCTGAGAATACGGTTTTCGATGCAAAACGAC 363293 Query 349401 TTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTA 349460 | ||||| ||| |||| ||| | | ||| ||| ||||||| || |||| Sbjct 363292 TGATTGGAAGACGTTTCGATGAGTCAGTTGTTCAAGAAGATTGTAAACATTGGCCGTTTA 363233 Query 349461 CTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAA 349520 ||| || |||| | ||| |||||| | |||| |||||| ||||| ||| || Sbjct 363232 CTG-TGAAGGAAAAAA--GTGGAAAACCAGTGGTTGAAGTTGAAGTGAAAGGAGAAAAAC 363176 Query 349521 AACAATTTTTACCCGAAGAAATTTCATCAATGGT--TTTAGTTAAAATGAAGGAAATTGC 349578 || || || |||||| | ||| ||||||| || || || |||||||||| ||| Sbjct 363175 GTCAGTTCAATCCGGAAGAAGTCTCAGCAATGGTACTTCAG--AAGATGAAGGAAACTGC 363118 Query 349579 TGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAA 349638 |||| |||| | || | | || | |||||||| || ||||| || || || || || Sbjct 363117 TGAAAAATATCTTGGACATCCTGTCAAAGATGCTGTGATCACTGTTCCTGCTTACTTCAA 363058 Query 349639 TGATGCCCAGCGTTCTGCAACAAAAG 349664 || || || |||||||||| Sbjct 363057 CGACAGTCAACGACAAGCAACAAAAG 363032 Score = 107 bits (118), Expect = 6e-18 Identities = 529/841 (63%), Gaps = 77/841 (9%) Strand=Plus/Plus Query 182894 TCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGA 182953 ||| |||||||| || ||| || || | ||| ||||| | || | ||| || | Sbjct 362187 TCCGGTTGATTTGTCTTCAGCGGATACGTTCAGAATTCCATTCGCATCGATATCGAAAGT 362246 Query 182954 TACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTA--AATTCA 183011 |||||||| |||||||| || ||||| || |||||||||| | ||| ||| | Sbjct 362247 GACTTCAATTTGTGGAACTCCACGTGGAGCAGGAGGAATTCCAG--AGAGTTCGAATGTA 362304 Query 183012 CCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACT 183071 || | | |||||| ||| |||| | || |||||||| |||||||| |||| Sbjct 362305 CCAAGACGGTGATTATCACGAGTCATTGCACGTTCTCCTTCATAGACTTGAATGAAAACT 362364 Query 183072 GCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCT----TTTTATTAATAGGAATAGT 183127 | || ||||| ||| ||| || | ||| || | |||| || ||||| || Sbjct 362365 GATGCTTGATTGTCAGAATATGTGGTGAAAGTTTTCGAAGCTTTTGTT----GGAATTGT 362420 Query 183128 TGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAA 183187 | ||||| || ||| |||||| ||| ||| |||||||| | ||| | || Sbjct 362421 GGTATTTCTATCAATAATACTAGTCATAACTCCTCCAGCAGTTTCAATTCCAAGACTCAA 362480 Query 183188 TGGTGCTACATCTAGTAATAATAAATC--TGATGTTTTATCTGATTTAATATCACTTAAA 183245 |||||| ||||| | | |||| ||| |||| | | || ||| | || | Sbjct 362481 TGGTGCAACATCGACAAGCAATACATCCTTGAT--TGTGTCGTCTTTGACTCCAGAAAGT 362538 Query 183246 ATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT 183305 | || ||||| ||||| || ||| |||| ||||||||||| || || ||||||| | | Sbjct 362539 ACAGCTGCTTGGACAGCAGCTCCAAATGCGACAGCTTCATCCGGATTTATTGAACAATTT 362598 Query 183306 AATTCTTT---GCCATTAAA------AAATTC---------------------------- 183328 ||||| | | |||||| |||||| Sbjct 362599 AATTCCTGTAAGTTATTAAATAGATTAAATTCATCAGTCGAGAATTCAGAACTTACCTTT 362658 Query 183329 ----TGAAA----------GCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACT 183374 ||||| |||| | |||||| ||||||| | |||||| || || || Sbjct 362659 CCATTGAAAAAGTCTTTGAGCATCTTTTGAATCTTTGGAACACGAGTTGATCCTCCAACC 362718 Query 183375 AATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACA 183434 || || |||||||| || || ||| || || ||||| | | | || ||||| Sbjct 362719 AAAACGACTTCATCAATCTTTGATTTGTCAAGTTTCGAATCCCGGAGAGCCTTCTCAACT 362778 Query 183435 GGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTC---TAGTT 183491 || || | ||| || | || | ||| |||||| ||||| || | || | || || Sbjct 362779 GGTTCAAGAGTCTTACGGAACAGATCAGCACATAATTCTTCAAAACGAGCACGTGTAATT 362838 Query 183492 AAAGATGaaaaaaaGTCAATACCATTATATAAG-GAATCAATTTCAATCGATGTTTGTGT 183550 ||| | ||| ||||| || || | ||| ||||| | ||| | | || || | Sbjct 362839 CGAGAGCACAAA---TCAATTCC-TTCGAAAAGCGAATCGACTTCGACAGTTGCTTCCGA 362894 Query 183551 AGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCT 183610 || || | ||| || || ||||||||||| || |||| || || || | | | Sbjct 362895 TGAACTAGAGAGTGTCCTCTTGGCTCGTTCACAAGCAGTTCGAAGGCGTCGAATGGCACG 362954 Query 183611 TGGATTATCTGTAATATCTTGTTTATGT-TTTCTTTTAAATTCAGTAATAAAATGTTGAA 183669 |||||| || ||||| | || ||| |||||||| |||||| | || |||||||||| Sbjct 362955 TGGATTCGGTGAGATATCCT-TTCCTGTCTTTCTTTTGAATTCATTCATGAAATGTTGAA 363013 Query 183670 G 183670 | Sbjct 363014 G 363014 >seq3664 Length=2010644 Score = 154 bits (170), Expect = 4e-32 Identities = 256/369 (69%), Gaps = 3/369 (1%) Strand=Plus/Plus Query 349520 AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCT 349579 |||||||| || |||||| |||| | |||||| | || |||||| |||| ||| Sbjct 680009 AAACAATTCACTCCAGAAGAAGTTTCCGCTATGGTTCTCACCAAGATGAAGCAAATCGCT 680068 Query 349580 GAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAAT 349639 || | ||| | || | ||| | |||||||| | || || || || || || ||| Sbjct 680069 GAGTCTTATCTCGGACACGAAGTGAAAAATGCTGTTGTCACAGTCCCGGCATACTTCAAT 680128 Query 349640 GATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGA 349699 ||||| ||| | || || ||||||||||| | |||||| || | || ||| | ||| Sbjct 680129 GATGCTCAGAGACAAGCTACCAAAGATGCTGGAACCATTGCAGGACTCAACGTTGTCAGA 680188 Query 349700 ATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA 349759 || || ||||| || || ||||| |||||||| |||||| | ||||| || || | Sbjct 680189 ATCATCAATGAGCCGACAGCTGCCGCAATTGCCTATGGGTTGGATAA---GAAAGAAGGA 680245 Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 ||| |||||||| | || || || || ||||| |||||||| || || || || || Sbjct 680246 GAACGCAATATTCTCGTCTTCGACTTGGGAGGTGGAACTTTTGACGTGTCCCTTCTCACC 680305 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 | || | || |||| |||||| || || ||| ||||| || | || |||||| Sbjct 680306 ATCGACAACGGTGTTTTCGAAGTTCTTGCCACCAATGGAGATACCCACTTGGGAGGAGAA 680365 Query 349880 GATTTTGAT 349888 || || ||| Sbjct 680366 GACTTCGAT 680374 >seq3667 Length=2326506 Score = 129 bits (142), Expect = 2e-24 Identities = 203/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 130718 TTCATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGC 130777 || ||| ||| |||| || | |||||||| ||| || || || ||||| || || || || Sbjct 1693291 TTGATCGTGTCCAGCGAAGAGTCCTCCAATCATGACGAAGTCTGCTCCGGCACCGAAGGC 1693350 Query 130778 TTTCGCAATATCCCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCC 130837 || || | ||| || || | || || || ||| || |||||||| || | || Sbjct 1693351 CTTGGCTACATCTCCTGGGTTGCTGCATCCACCGTCACTCATCACATGTCCGTTGAGACC 1693410 Query 130838 ATGTGCCGCATCAGCACACTCTGAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTAC 130897 ||| || || ||||| ||||| | | |||| || ||||| ||||||||||||| Sbjct 1693411 ATGAGCAGCGTCAGCGCACTCCAACACAGCACTGAGCTGTGGGTATCCAACTCCAGCCTT 1693470 Query 130898 TTTTCTTGTAGTACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCCTGC 130957 || | || || || || | ||||| || || || | ||| |||||||| ||||||| Sbjct 1693471 CTTGCGAGTGGTGCAGACCGATCCTGGTCCGATTCCGACTTTGACAATATCGGCTCCTGA 1693530 Query 130958 TAAAATTAGTGCTTCGGTCATTTCTCTAGTAGCCACATTACCTGCTATGAT 131008 | ||| || ||||| |||||||| ||| | || || || || ||||| Sbjct 1693531 GAGAATAAGCTCTTCGACCATTTCTCCAGTTACAACGTTTCCAGCCATGAT 1693581 Score = 129 bits (142), Expect = 2e-24 Identities = 203/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 130718 TTCATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGC 130777 || ||| ||| |||| || | |||||| | ||| || || || ||||| || || || || Sbjct 1699274 TTGATCGTGTCCAGCGAAGAGTCCTCCGATCATGACGAAGTCTGCTCCGGCACCGAAGGC 1699333 Query 130778 TTTCGCAATATCCCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCC 130837 || || | ||| || || | || || || ||| || ||||||||||| | || Sbjct 1699334 CTTGGCTACATCTCCTGGGTTGCTGCATCCACCGTCACTCATCACATGTCCATTGAGACC 1699393 Query 130838 ATGTGCCGCATCAGCACACTCTGAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTAC 130897 ||| || || || || ||||| | |||| || ||||| ||||||||||||| Sbjct 1699394 ATGAGCAGCGTCGGCGCACTCCAGCACAGCACTGAGCTGTGGGTATCCAACTCCAGCCTT 1699453 Query 130898 TTTTCTTGTAGTACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCCTGC 130957 || | || || || || | ||||| || || || | ||| |||||||| ||||||| Sbjct 1699454 CTTGCGAGTGGTGCAGACCGATCCTGGTCCGATTCCGACTTTGACAATATCGGCTCCTGA 1699513 Query 130958 TAAAATTAGTGCTTCGGTCATTTCTCTAGTAGCCACATTACCTGCTATGAT 131008 | ||| || ||||| |||||||| ||| ||||||| || || ||||| Sbjct 1699514 GAGAATGAGCTCTTCGACCATTTCTCCAGTGACCACATTTCCAGCCATGAT 1699564 >seq3618 Length=512689 Score = 125 bits (138), Expect = 2e-23 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | || || || | ||| || || ||||| || || || || || || Sbjct 495183 CATGCCTCCACGGAGTCGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 495124 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| |||||||| |||||||| ||||| || | ||||||||| | Sbjct 495123 GGAAAGAGTACGTCCATCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGATCTGC 495064 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || |||||||| || || || || || || || || || || || | || || | ||| Sbjct 495063 TGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGAAGCTTC 495004 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||||||||| || || || || || || |||||| Sbjct 495003 GACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATTTGCATT 494952 Score = 122 bits (134), Expect = 3e-22 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | || || || | ||| || || ||||| || || || || || || Sbjct 509367 CATGCCTCCACGGAGTCGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 509308 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| |||||||| ||| |||| ||||| || | ||||||||| | Sbjct 509307 GGAAAGAGTACGTCCATCCTCAAGTTGCTTTTCAGCGAAGATGAGTCTTTGCTGATCTGC 509248 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || |||||||| || || || || || || || || || || || | || || | ||| Sbjct 509247 TGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGAAGCTTC 509188 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||||||||| || || || || || || |||||| Sbjct 509187 GACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATTTGCATT 509136 >seq2032 Length=7970 Score = 125 bits (138), Expect = 2e-23 Identities = 183/252 (73%), Gaps = 14/252 (6%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 |||||||| ||| || || ||||| ||| |||||||||| || ||||||||||| Sbjct 2289 AAAATGAAAAAAACTGGGGAG--ATATT-AGG--AAACAGTAACAGAAGCTGTTATTACA 2343 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || || || || |||||||| || ||| ||||||||||||||||| | ||||| Sbjct 2344 GTTCCTGCTTACTTCAATGATGCACAACGTCAAGCAACAAAAGATGCTGGTCGTATTGCT 2403 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || || | ||| | | || ||||| ||||| |||||||| ||| |||| | || | Sbjct 2404 GGTCTAGAAGTTAAACGTATCATTAACGAACCAACTGCTGCTGCACTTGCGTTCGGTATG 2463 Query 349742 GA-TAAAATGA--GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || |||| || | |||| | ||| || | | | ||| |||||||||||||| Sbjct 2464 GACAAAAAAGAAGGCGACC--GTAAA----GTTGCTGTATATGACTTAGGTGGTGGTACA 2517 Query 349799 TTTGATGTATCA 349810 ||||| |||||| Sbjct 2518 TTTGACGTATCA 2529 Score = 100 bits (110), Expect = 9e-16 Identities = 299/459 (65%), Gaps = 17/459 (4%) Strand=Plus/Plus Query 350192 TTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAAT 350251 || ||||||||| ||||||| |||| ||||||||| | || ||||| || Sbjct 2935 TTGGTTGGTGGTCAATCACGTATGCCAATGGTTCAACAGAAAGTACAAGAGTTCTTC--- 2991 Query 350252 GGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTT 350311 || ||||||||| || | | || || ||||||||||||||| ||||||||| || Sbjct 2992 GGTAAAGAACCTCGTAAAGATGTGAACCCGGATGAAGCTGTTGCAATTGGTGCTGCAATT 3051 Query 350312 CAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGAT 350371 || | | | || |||| || |||| ||| | || | |||| || Sbjct 3052 CAAGGTGCGGTATTGTCTG---------GTGACAAAACTGACG---TACTTTTACTTGAC 3099 Query 350372 GTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCT 350431 ||||| ||| | | ||||| | ||||| |||| ||| | |||| ||||| Sbjct 3100 GTAACACCATTAACACTTGGTATCGAAACCATGGGTGGCGTATTAACTGCAATTATTGAG 3159 Query 350432 AGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAG 350491 | ||| | || | ||| | || || || ||| ||||||||| |||||||| || Sbjct 3160 AAAAACACCACGATTCCTGCGAAGAAATCTCAAGTGTTTTCTACAGCAGCAGATAACCAA 3219 Query 350492 CCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAA 350551 ||||||||| ||| ||| | ||||||||||| || || | || || | Sbjct 3220 CCAGCGGTAGATATTTCAGTTTACCAAGGTGAACGTAAAATGGCTCAACAAAACAA-ATT 3278 Query 350552 CTTGGAGAATTTAC-CCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGA 350610 |||| || || | || | || |||||||| ||| | || || || || ||||| Sbjct 3279 GTTGGGTAACTTCCAATTAGGCGACATTCCACCTGCGCCACGTGGTGTGCCACAAATTGA 3338 Query 350611 AGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGT 350649 ||| || ||||| || || | ||||||| ||||| || Sbjct 3339 AGTATCGTTCGACATCAATGCTGATGGTATCTTAAAAGT 3377 >seq3642 Length=748538 Score = 100 bits (110), Expect = 9e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 266972 AATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATTATTCC 267031 ||| || || |||||| | ||| ||||| || |||||||| || |||| || || Sbjct 123725 AATTGGAGACAAATTTGCATCTCGTCACGGTCAGAAAGGTACAATGGGTATCATGTATCG 123666 Query 267032 TGAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCA 267091 ||||| ||||||| || | || || ||| ||| |||||||| || ||||| ||||| Sbjct 123665 GCAAGAAGATATGCCTTTCACTGCTGAAGGACTTACTCCTGATATCATCATTAACCCTCA 123606 Query 267092 TGCTATTCCTAGTCGTATGACAATTGGTCAATT 267124 ||| |||| |||||||||||||||||| || Sbjct 123605 TGCGGTTCCGTCTCGTATGACAATTGGTCACTT 123573 >seq3660 Length=1640336 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || || ||||| || | ||||||||| || ||||||||||| || || || || ||||| Sbjct 486263 CCGGCGAAGATCAGTCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGGATCTTAGCC 486322 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | ||| || | || ||||| || |||| ||||| || || || Sbjct 486323 TTGACATTCTCGATGGTATCGGAGGCCTCGACTTCGAGGGTAATAGTCTTACCCGTCAGA 486382 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || || || ||||| Sbjct 486383 GTCTTGACGAAGATTTGCAT 486402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515183149897010