Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_030932.1 Length=43505 Score E Sequences producing significant alignments: (Bits) Value seq2269 125 2e-24 >seq2269 Length=8036 Score = 125 bits (138), Expect = 2e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 23431 GCTACGGCGTCGAGATCGTCGTCGAAGAGATCGGCGTATGTGTCGAGCGTCATAGCGGCT 23490 || ||||| || || ||||| ||||| || || ||||| |||||| ||||| || ||| Sbjct 7975 GCGACGGCATCCAGGTCGTCCTCGAACAGGTCCGCGTACACGTCGAGAGTCATTGCCGCT 7916 Query 23491 GACGAGTGCCCGAGCATCCGTTGCACTGCCTTCACGTTCGCGCCCGCCGAGATCGCGAGG 23550 || | ||||||||||||||| || || ||||||||||||||||| || | | || ||| Sbjct 7915 GAGGTGTGCCCGAGCATCCGCTGGACCGCCTTCACGTTCGCGCCGGCGGCAACGGCAAGG 7856 Query 23551 CTCGCGGCAGTGTGGCGCAAGTCGTGCGCGGTGACCCGAGGGAA 23594 ||| |||||||| || | ||| || | |||| ||| ||||| Sbjct 7855 GACGCTGCAGTGTGCCGGAGGTCATGAGGTGTGATCCGCGGGAA 7812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139088338092180