Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq802 96.9 4e-15 >seq802 Length=2299 Score = 96.9 bits (106), Expect = 4e-15 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 120467 GGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 120526 || || || ||||| || | || || || ||||| |||||| |||| |||||||| Sbjct 977 GGCCCCGGTCGTGGCTCGGGCGCGGGATCCATGGTCGCCTACGCCATGCGCATCACCGAT 1036 Query 120527 ATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGC--CCCG 120584 |||||||| | || ||| || || |||||||| ||| ||||||| |||||| | || Sbjct 1037 CTCGATCCGCTGCAGCACGGACTCATCTTCGAGCGATTCCTCAACCCCGATCGCGTCTCG 1096 Query 120585 ACTTTCCCGACATCGACGTCGACTTC 120610 | | |||||| |||||||||||||| Sbjct 1097 A--TGCCCGACTTCGACGTCGACTTC 1120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515000373274000