Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20sinica_20[WormBase_20PRJNA194557-WS256_202016-12- 10] 15,261 sequences; 131,797,386 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq974 82.4 6e-11 >seq974 Length=30670 Score = 82.4 bits (90), Expect = 6e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 99662 GTTTCTTTTGACCCATGCGATGTATGCGGTCTTGCGCTTGCAGCTCAATTTGCGGGTTCC 99721 |||||||||| |||||||| | || || || |||||| |||||| | ||| |||| Sbjct 14186 GTTTCTTTTGTCCCATGCGGTAAATACGATCACAGGCTTGCTGCTCAAGTGCCGGATTCC 14245 Query 99722 AATGCGGCTCCAACATGATTATGTGATTGCCGCCGACCAAATTTAATCCCACACCGCC 99779 ||||| || | ||| || | ||||| |||||||||||||| | ||| ||||| || Sbjct 14246 AATGCAAATCAATCATAATCAAATGATTTCCGCCGACCAAATTGAGTCCAACACCACC 14303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425264888807320