Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20sinica_20[WormBase_20PRJNA194557-WS256_202016-12- 10] 15,261 sequences; 131,797,386 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1318 96.9 3e-15 >seq1318 Length=24791 Score = 96.9 bits (106), Expect = 3e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 118177 TTCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATAC 118236 |||| || | |||||| ||||| ||||||||||||| || || | ||||| || | || Sbjct 1837 TTCCATCTCTACCGGCTCTTCCCGTCTCTTGATAATATCCTTCGATGGATTTCGGTAAAC 1778 Query 118237 TGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 ||| ||| ||||| || || || ||||| |||||||| ||||| || ||||| || || Sbjct 1777 TGTAATGGATCACAAATCGAACATCGGGCTTATCGATTCCCATTCCAAACGCGATGGT 1720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381701792764584