Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20sinica_20[WormBase_20PRJNA194557-WS256_202016-12- 10] 15,261 sequences; 131,797,386 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq350 360 3e-94 seq1879 248 1e-60 seq8705 206 3e-48 seq4266 196 6e-45 seq1197 194 2e-44 seq1737 172 7e-38 seq343 118 1e-21 seq1110 91.5 2e-13 seq868 89.7 7e-13 >seq350 Length=55662 Score = 360 bits (398), Expect = 3e-94 Identities = 828/1241 (67%), Gaps = 87/1241 (7%) Strand=Plus/Plus Query 195611 GGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAG 195670 || ||||||| ||| || |||||||||||| ||| | ||||| | ||||||||| Sbjct 36497 GGAGAGAAGAGACAGTTCAATCCCGAAGAAATCTCGGCGATGGTTCTCCAGAAGATGAAG 36556 Query 195671 GAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730 || || |||||| | | | || | |||| ||||| || || | ||||||||||| Sbjct 36557 GAAACCGCGGAAACGTATCTCGGACATTCTGTCAAAGACGCTGTGATTACTGTACCTGCC 36616 Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 || |||| ||| || |||| || |||||||| || || | ||||| || || || Sbjct 36617 TATTTCAACGATAGTCAGAGACAAGCCACAAAGGATGCAGCCACCATTGCTGGACTCAA- 36675 Query 195791 TGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 || | | ||||| |||||||| ||||| || ||||| | |||||||| |||||||| | Sbjct 36676 TGCCATCAGAATCATCAATGAGCCAACTGCTGCTGCTTTGGCTTATGGACTGGACAA-AG 36734 Query 195850 CAAGGACGAA-GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCT 195908 || || | || || || || ||||| || ||||| || || ||||| || ||||||| Sbjct 36735 GAATCTCGGATGAGAAGAACGTTTTGATTTTCGATCTTGGAGGAGGTACATTCGATGTCT 36794 Query 195909 CACTTCTCAATATTG---AAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTC 195965 | | || | |||| |||| || |||||||| ||| | |||||||| || |||| Sbjct 36795 CCATCCTTACCATTGCCGAAGGATCCATCTTCGAAGTGAAGTCCACTGCTGGAGACACTC 36854 Query 195966 ATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGAT-GAGTTCCGT 196024 |||| ||||| |||||||| || ||| | || | || || ||| |||||| Sbjct 36855 ATCTTGGTGGAGAAGATTTTGACCAACGAATGCTTCAACACTTCA-TGACCGAGTTCAAG 36913 Query 196025 CGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCA 196084 || |||| | || ||||||||| ||||| | || | | || ||| | ||||| Sbjct 36914 CGGAAGACTGGAAAGGATATTTCTCCGAATCCCCGTGCCATCAGACGTCTTCGAACTGCT 36973 Query 196085 TGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCG 196144 |||||||||||||| ||||||| || | || || | | |||||| ||||||| Sbjct 36974 TGTGAACGTGCCAAGAGAACTCTTTCAAGCTCTTCTGAAGCCACCGTTGAGGTTGATTCC 37033 Query 196145 TTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAAC 196204 | || || ||||| || ||| | | || || ||||| || ||||| || | Sbjct 37034 CTCTTCGAAGGAATCGATCTCTGCTCCAGAATCACTCGTGCTCGCTTTGAGGAACTCTGT 37093 Query 196205 TCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATG 196264 | ||| | || | ||| | | ||||||||||| | | || || || || || || Sbjct 37094 GCCGATCTATTCCGAAAGACTCTTGAACCTGTTGAGAAGGCTCTCCGAGATGCGAAATTG 37153 Query 196265 GATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATT 196324 || ||||| ||| |||||||| | ||| | || |||||||| || ||| |||| |||| | Sbjct 37154 GACAAGTCAAAGATTGATGAAGTCGTCTTGGTTGGAGGATCTACTCGTGTTCCAAAGA-T 37212 Query 196325 CAACAGATGCT-TTCTAG--CTTCTTCAAT---AA--TAA-------------------- 196356 | |||| || || || |||||||||| || ||| Sbjct 37213 C--CAGAAACTCTTGAAGGACTTCTTCAATGGAAAGGTAAGTTCAAACTCTCTCCACAAC 37270 Query 196357 -----AGATTTAA-------------------ACAAAA-----CGATCAACCCGGATGAA 196387 | |||||| || || ||||||| || |||||| Sbjct 37271 CAATTAAATTTAACTGAATCTAATTTTCAGGAACTCAATTGCTCGATCAATCCAGATGAA 37330 Query 196388 GCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAAC 196447 || ||||| | |||||| || || || ||||| | || || || | | || | | | Sbjct 37331 GCCGTTGCCTTTGGTGCAGCGGTCCAAGCTGCCGTCCTTTCCGGAATCAAGGATCAGACC 37390 Query 196448 GTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGT 196507 || ||||| | |||| |||| || || || | || || | |||||||| || Sbjct 37391 ATCAAAGATGTCTTGCTCGTTGACGTGGCTCCATTGAGTCTCGGAATCGAAACAGCTGGA 37450 Query 196508 GGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAA--CAAG 196565 ||||| ||||| || || || ||| | ||||| || ||||| || ||||| ||| Sbjct 37451 GGTGTCATGACAAACATCATCGATCGTAACACCACGATTCCAAC---GAAGGCCTCCAAA 37507 Query 196566 TCTTTT-CAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAA 196624 |||| | ||||||||||| || |||||||| || |||||||| |||||||||||| Sbjct 37508 ACTTTCACCACGTATTCCGACAACCAACCAGGAGTATCCATTCAAGTCTATGAAGGAGAA 37567 Query 196625 CGCTCCCGTGCAAAG------GATAACCATCTACTTGGAACTTTCGATTTGACGGGGATT 196678 || ||||| | || ||||||| ||||| || ||||| | | || || Sbjct 37568 CG------TGCAATGACTCGTGACAACCATCGTCTTGGTACATTCGAACTTTCCGGAATC 37621 Query 196679 CCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGA 196738 || | || || | || ||||| || ||| | || |||||||| || ||||||||| Sbjct 37622 CCGCCAGCTCCACGTGGAGTTCCCCAAATTGAAGTCACTTTCGATATCGATGCAAATGGA 37681 Query 196739 ATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATC 196779 |||||||| || |||||||||| || | |||| ||||| Sbjct 37682 ATTCTAAATGTGTCAGCTGAGGATAAATCCACTGGAAAATC 37722 >seq1879 Length=19138 Score = 248 bits (274), Expect = 1e-60 Identities = 395/567 (70%), Gaps = 0/567 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || |||||||| ||||| ||||| ||| | |||||||||||||| || || ||||| | Sbjct 18534 CCAGAAGAAATCTCGTCGATGGTTTTGCTGAAGATGAAGGAGACCGCTGAGGCTTTCCTC 18593 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | || || || ||||| || | ||||| || |||||||||| || || ||||| Sbjct 18594 GGAAGCACCGTCAAGGATGCCGTCATCACTGTCCCAGCTTACTTCAACGACTCGCAACGT 18653 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || ||||| || | ||||| | || | ||| ||| | || ||||| || Sbjct 18654 CAGGCCACCAAGGATGCCGGAGCTATCTCTGGAGTCAACGTCCTTCGTATCATCAACGAG 18713 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 ||||| || || || || || || ||||| |||||||| ||| ||| || || Sbjct 18714 CCAACTGCTGCCGCTATCGCCTACGGTCTTGACAAGAAGGGACACGGAGAACGCAACGTT 18773 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| ||||| || |||||||| || ||||| || |||| | ||||| | || Sbjct 18774 CTCATCTTCGATCTTGGAGGTGGTACCTTCGATGTGTCCATTCTTACCATTGAGGACGGA 18833 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCA 195991 || ||||| || ||| ||||||| || || || ||||| || || ||||| ||||| Sbjct 18834 ATCTTCGAGGTCAAGTCTACTGCCGGAGACACCCATCTTGGAGGAGAAGACTTCGACAAC 18893 Query 195992 CGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGA 196051 || | || || || || ||||||| || ||| | ||||| ||| || | Sbjct 18894 CGCATGGTCAACCACTTCGTTGCTGAGTTCAAGCGCAAGCACAAGAAGGATCTTGCCTCT 18953 Query 196052 AATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCT 196111 || || | ||||||||||| ||| | ||||| || || || || || ||||||| || Sbjct 18954 AACCCACGTGCTCTTCGTCGTCTTCGCACTGCTTGCGAGCGCGCAAAGAGAACTCTTTCG 19013 Query 196112 TCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA 196171 || | | || | | | ||||| || || | || || ||||| |||||||| || Sbjct 19014 TCCTCTTCCCAGGCTTCGATCGAGATCGACTCTCTCTTCGAGGGAATCGACTTCTACACC 19073 Query 196172 ACTATTACCCGTGCACGTTTTGAAGAG 196198 | || || ||||| ||||| || ||| Sbjct 19074 AACATCACTCGTGCCCGTTTCGAGGAG 19100 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 195303 TTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAG 195362 |||| |||||| | ||||| |||||||| ||||| || || | ||| | | || | Sbjct 18123 TTGGAATCGATCTCGGAACCACTTACTCCTGTGTCGGAGTTTTCCAACACGGAAAGGTCG 18182 Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422 |||| || | || || ||||||||| | || ||||||||||| |||||||| || || Sbjct 18183 AGATCATTGCTAACGATCAAGGAAACAGAACCACTCCATCGTATGTTGCCTTCACCGACT 18242 Query 195423 ATGAACGTCTC 195433 |||||||||| Sbjct 18243 CTGAACGTCTC 18253 >seq8705 Length=1774 Score = 206 bits (228), Expect = 3e-48 Identities = 418/615 (68%), Gaps = 14/615 (2%) Strand=Plus/Minus Query 195381 AAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAG 195440 |||||||| ||||| || || || || ||||| || |||| ||||| | || |||| Sbjct 1743 AAGGAAACAAAACAACGCCTTCATATGTCGCCTTCACTGATACAGAACGATTGGTCGGAG 1684 Query 195441 ATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTC 195500 |||| |||||| |||| ||||| || || ||||| || || || |||||| | | Sbjct 1683 ATGCAGCAAAAGATCAAGCAGCTCGAAATCCAGAGAATACAGTATTCGATGCGAAGAGAC 1624 Query 195501 TTATTGGTCGCAAGTTTTCGGATAAGAAA--GTCCAAGACGATATAAAGGACTGGTCTTA 195558 | || || | ||| || ||| || || ||| || || | ||| | | Sbjct 1623 TGATCGGCAGACGGTT--CGATGAAGCAACAGTTCAATCAGACTGCAAACATTGGCCATT 1566 Query 195559 TGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAA 195618 || ||| || | ||||| ||||| | ||||| | | || || || Sbjct 1565 TGGAGTGAAA---GGAAAACAAGGAAAGCCAGTGATTGAAGTTGAGATGAAAGGAGAAAA 1509 Query 195619 GAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGC 195678 || ||||| ||| |||||||| || | ||||| | ||||||||||| ||||| Sbjct 1508 GAGGCAATTCAATCCGGAAGAAATCTCAGCAATGGTACTTCAGAAGATGAAGGAAACTGC 1449 Query 195679 GGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAG 195738 || | | | |||| | | || || |||||||| | ||||||||||| ||||||| Sbjct 1448 AGAGACATACCTGGGACATGCAGTCAAGGATGCAGTCATTACTGTACCTGCATACTTCAA 1389 Query 195739 TGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAG 195798 || || |||| || ||||| || || || | ||||| || | ||| || | Sbjct 1388 CGACAGTCAGAGACAAGCAACAAAAGATGCAGCCACGATTGCTGGATTGAACGCCATTCG 1329 Query 195799 AATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAA--GAACAAGGAC 195856 ||| |||||||||||||| || ||||| |||||||||| ||||||| | | || Sbjct 1328 AATCATCAATGAACCAACTGCAGCTGCTCTTGCTTATGGATTGGACAAAGGGATCAG--T 1271 Query 195857 GAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA---CTT 195913 ||||| || |||||||||||||| |||||||| || ||||| || ||||| ||| ||| Sbjct 1270 GAAGAGAAGAATGTATTGATCTTCGATCTCGGAGGAGGTACTTTCGATGTTTCAATCCTT 1211 Query 195914 CTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGT 195973 || | |||||| || |||||||| || | || || || ||||||||||| || Sbjct 1210 ACCATTGCTGAAGGATCCATCTTCGAAGTCAAATCAACAGCGGGAGATACTCATCTCGGA 1151 Query 195974 GGTGAAGATTTCGAT 195988 || || ||||||||| Sbjct 1150 GGAGAGGATTTCGAT 1136 Score = 199 bits (220), Expect = 5e-46 Identities = 333/475 (70%), Gaps = 10/475 (2%) Strand=Plus/Minus Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTTAA 196364 || ||| |||| ||||||||| ||||||| | || ||| ||||| || || | | Sbjct 830 ACTCGTGTTCCCAAGATTCAAAAGATGCT--CAAGGACTTTTTCAACGGAAAGGAACTCA 773 Query 196365 ACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTC 196424 || | ||||| || |||||||||||||| | || || || ||||| || || | | Sbjct 772 ACTGCTCAATCAATCCCGATGAAGCAGTTGCATTCGGAGCTGCAGTTCAAGCAGCCGTAC 713 Query 196425 TCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 | || || || | || | | || ||||| |||| || |||||||||| || | Sbjct 712 TGTCCGGAGTCAAGGATCAAACAATCAAAGATGTTCTACTCGTTGATGTTGCTCCATTGA 653 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 || || | || ||||| |||||||| ||||| || | |||||| | ||||| | Sbjct 652 GTCTTGGAATCGAGACAGCTGGTGGTGTGATGACCAATCTGATTGATCGAAACACTCGAA 593 Query 196545 TTCCGACTAAG--AAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCA 196602 |||| || ||| | || || || |||| ||| |||| ||||||||||| ||| Sbjct 592 TTCCAACAAAGGCATCGA--AAACATTCACAACATATGCCGACAATCAACCAGGAGTTTC 535 Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTT 196661 |||||||| || ||||||||||| | || || | |||||||||| || ||||| | Sbjct 534 AATTCAAGTCTACGAAGGAGAACG-TGCCATGACTCGTGATAACCATCGTCTCGGAACAT 476 Query 196662 TCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCG 196721 |||| |||| || || ||| |||| || | || ||||| |||||| | || |||| Sbjct 475 TCGAATTGAGCGGAATCCCACCTGCTCCACGTGGAGTTCCTCAGATTGAAGTCACTTTCG 416 Query 196722 ATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAA 196776 | || || ||||| |||||||| || || |||||||||| ||| | |||| || Sbjct 415 ACATCGATGCAAACGGAATTCTGAATGTGTCAGCTGAGGATAAGTCAACTGGAAA 361 >seq4266 Length=8006 Score = 196 bits (216), Expect = 6e-45 Identities = 412/608 (68%), Gaps = 10/608 (2%) Strand=Plus/Minus Query 196275 AGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGC 196334 |||| | || || || || || |||||||| ||||||||||| ||| | || || | | Sbjct 7758 AGGTCCACGATATCGTTCTCGTCGGAGGATCCACCCGTATTCCAAAGGTCCAGAAGCTTC 7699 Query 196335 TTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTG 196394 | ||| | | ||| | || || | ||||| | |||||||| || || || || | Sbjct 7698 TCTCTGACCTTTTCTCTGGCAAGGAACTCAACAAGTCTATCAACCCAGACGAGGCTGTCG 7639 Query 196395 CTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA---TAATAACGTCC 196451 |||| || || || || |||||||||||||| || || ||||| | |||| Sbjct 7638 CTTACGGAGCCGCTGTCCAGGCTGCTATTCTTTC---TGGAGACAAGTCCGAGGCTGTCC 7582 Query 196452 AAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTG 196511 |||| | || || || || || || || | ||||| ||| |||| || || || || | Sbjct 7581 AAGACTTGCTTCTTCTCGACGTCGCCCCACTTTCCCTCGGTATTGAGACTGCTGGAGGAG 7522 Query 196512 TTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTT 196571 | |||||| | || | || ||||| || || || || |||| | || ||| Sbjct 7521 TCATGACTGCTCTCATCAAGAGAAACACCACCATCCCAACCAAGACTGCTCAGACCTTCA 7462 Query 196572 CAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCC 196631 | || || || || || || ||||| || || || || || |||||||| || | || Sbjct 7461 CCACTTACTCTGACAACCAGCCAGGAGTGTTGATCCAGGTTTACGAAGGAGAGCG-TGCC 7403 Query 196632 GTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCC 196690 || | ||||| ||| | | || |||| ||||| | | || |||||| | ||||| Sbjct 7402 ATGACCAAGGACAACAACTTGCTCGGAAAGTTCGAGCTCTCCGGAATTCCACCAGCACCA 7343 Query 196691 AGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTC 196750 | ||||| ||||| || | ||| |||||||| || || || ||||| | |||||| Sbjct 7342 CGTGGTGTCCCACAAATCGAAGTTACTTTCGATATTGATGCCAACGGAATCTTGAACGTC 7283 Query 196751 ACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA-AAGATTGTGATTACCAATGACAAGGG 196809 | || |||||| | | || ||| | ||| ||||| || || || |||||||| Sbjct 7282 TCTGCCACTGACAAGTCCACCGG-AAAGCAGAACAAGATCACCATCACTAACGACAAGGG 7224 Query 196810 GCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGA 196869 || ||||| ||||| || || || || |||||| | || || || ||||||| || || Sbjct 7223 ACGTCTTTCCAAGGACGACATCGAGCGGATGGTTAACGAGGCTGAGAAGTACAAGGCTGA 7164 Query 196870 AGACGAGG 196877 || |||| Sbjct 7163 CGATGAGG 7156 >seq1197 Length=26491 Score = 194 bits (214), Expect = 2e-44 Identities = 170/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||||||| | || Sbjct 22363 ATGCAGATCTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTTGAGGTTGAAGCCTCT 22304 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| ||||| |||||||| |||||||| |||||| Sbjct 22303 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGATCAG 22244 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || |||| || || || || || ||||| || ||||||||||||||| | || |||||| Sbjct 22243 CAGAGACTCATCTTCGCCGGAAAGCAGCTCGAGGATGGACGTACCCTCTCCGACTACAAC 22184 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | ||||||||||| || || ||| | ||||| Sbjct 22183 ATCCAAAAGGAGTCCACCCTTCACTTGGTTCT 22152 Score = 194 bits (214), Expect = 2e-44 Identities = 170/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| |||||||| || ||||||||||| || || | || Sbjct 23610 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTCGAAGCTTCC 23551 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||||| Sbjct 23550 GATACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAG 23491 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| |||| || || || || || |||||||| |||||||| ||| | ||||||||||| Sbjct 23490 CAAAGACTCATCTTCGCCGGAAAGCAGCTTGAGGATGGACGCACCTTGTCTGATTACAAC 23431 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| ||||| || || ||||| Sbjct 23430 ATCCAGAAGGAGTCGACTCTCCATCTCGTTCT 23399 Score = 176 bits (194), Expect = 6e-39 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || ||||| | ||||||||||| |||||||| ||||| ||| | || Sbjct 24343 ATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACGATCACCCTGGAGGTGGAGGCTTCT 24284 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| ||||| || ||||| ||||| || || ||||| || ||| Sbjct 24283 GACACCATCGAGAACGTCAAGGCCAAAATCCAAGACAAGGAGGGAATCCCACCAGACCAG 24224 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| |||| || || || || || ||||| || |||||| | || || | || |||||| Sbjct 24223 CAAAGACTCATCTTCGCCGGAAAGCAGCTCGAGGATGGAAGAACTCTTTCGGACTACAAC 24164 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| ||||| || || ||||| Sbjct 24163 ATCCAGAAGGAGTCGACTCTCCATCTCGTTCT 24132 Score = 170 bits (188), Expect = 3e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || || || || ||||| || ||||||||||||||||| | | Sbjct 21856 GTATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTTGAAGCCT 21797 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || ||||| ||| |||| || || || ||||| |||||||| || ||||| |||| Sbjct 21796 CTGATACCATCGAGAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATC 21737 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || | || || ||||| || ||||| || || ||||| ||| | | || |||| Sbjct 21736 AGCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGACGCACCTTGTCCGACTACA 21677 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 || | ||||||||||| || || || || ||||| | ||||| || || Sbjct 21676 ACATCCAAAAGGAGTCGACCCTTCATCTCGTTCTCCGTCTTCGTGGAGG 21628 Score = 167 bits (184), Expect = 3e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| |||||||| || || | |||||||| || ||||||||||| || || | | Sbjct 23384 GTATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCCTCGAAGTCGAAGCCT 23325 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || ||| |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct 23324 CCGATACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATC 23265 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || ||||||| || || || ||||| || || |||||| | || ||| | || |||| Sbjct 23264 AACAGAGACTTATCTTCGCCGGAAAACAACTCGAGGATGGAAGAACTCTCTCCGACTACA 23205 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | | || ||||| || ||||| ||| | ||||| | ||||| || ||| Sbjct 23204 ATATCCAGAAGGAATCCACTCTTCACTTGGTTCTCCGTCTTCGTGGAGGT 23155 Score = 163 bits (180), Expect = 4e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || |||||||| || |||||||| |||||||| | || || ||| | || Sbjct 22879 ATGCAGATTTTCGTGAAAACTCTCACTGGAAAGACTATCACTTTGGAAGTCGAGGCTTCT 22820 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||||||| || |||||||| |||||||| || || Sbjct 22819 GACACCATCGAAAATGTCAAGGCCAAGATTCAGGACAAGGAAGGAATTCCACCAGACCAA 22760 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| |||| || || || || || ||||| || |||||| | || ||| | || ||||| Sbjct 22759 CAAAGACTCATCTTCGCCGGAAAGCAGCTCGAGGATGGAAGAACTCTCTCCGACTACAAT 22700 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||| || ||||| ||| | || || | ||||| || ||| Sbjct 22699 ATCCAGAAGGAATCCACTCTCCACTTGGTGCTCCGCCTTCGTGGAGGT 22652 Score = 132 bits (146), Expect = 6e-26 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||||| |||||||| || ||||| ||||| || || | ||| Sbjct 23885 ATGCAGATCTTCGTGAAAACCCTCACTGGAAAGACCATCACACTCGAAGTCGAAGCTTCA 23826 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || ||| | || |||||||| || ||||||||||| |||||||| |||||| Sbjct 23825 GATACTATTGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCACCAGATCAG 23766 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || |||| || || || ||||| Sbjct 23765 CAGAGACTCATCTTCGCCGGTAA 23743 Score = 131 bits (144), Expect = 2e-25 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || ||||| || ||||| ||||||||||||||||| || | | Sbjct 22653 GTATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACTATCACCCTCGAGGTCGAAGCTT 22594 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| |||| ||||||||||| ||||||||||| || ||||| |||| Sbjct 22593 CCGACACCATCGAGAACGTCAAGGCCAAGATTCAGGATAAGGAAGGAATCCCACCAGATC 22534 Query 171980 AGCAACGACT 171989 | || |||| Sbjct 22533 AACAGAGACT 22524 Score = 127 bits (140), Expect = 3e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || | |||||||| || ||||||||||| || || | || Sbjct 22135 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACCATCACCCTCGAAGTCGAAGCCTCC 22076 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||||| Sbjct 22075 GATACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAG 22016 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || || | || ||||||||||| Sbjct 22015 CAGCGTTTGATCTTTGCTGGTAA 21993 Score = 127 bits (140), Expect = 3e-24 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || || | |||||||| ||||||||||||||||| || | | Sbjct 23156 GTATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACTATCACCCTCGAGGTCGAAGCCT 23097 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| | || |||||||| ||||| |||||||| ||||| || |||| Sbjct 23096 CTGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGATC 23037 Query 171980 AGCAACGACTTATTTTTGCTGGTAA 172004 |||| || | || || || ||||| Sbjct 23036 AGCAGCGCTTGATCTTCGCCGGTAA 23012 >seq1737 Length=20200 Score = 172 bits (190), Expect = 7e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || || || || || || || ||||||||||| ||| | || Sbjct 10008 ATGCAAATCTTCGTCAAGACTCTGACGGGTAAGACGATTACCCTCGAGGTCGAGGCTTCC 9949 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || |||| || ||||| || || |||||||| |||||||| |||||| Sbjct 9948 GATACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAG 9889 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| | || || || || || || ||||| ||||||||||| ||| | || |||||| Sbjct 9888 CAACGCTTGATCTTCGCCGGAAAGCAACTTGAGGATGGACGTACTCTCTCCGACTACAAC 9829 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||| | ||||| | ||||| || ||| Sbjct 9828 ATCCAGAAGGAGTCCACCCTTCACTTGGTTCTCCGTCTTCGTGGAGGT 9781 >seq343 Length=56457 Score = 118 bits (130), Expect = 1e-21 Identities = 254/379 (67%), Gaps = 3/379 (1%) Strand=Plus/Plus Query 195619 GAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGC 195678 ||| || || |||| |||||| ||||| | ||||| | | || |||||| | | || Sbjct 24217 GAAGCAGTTCACTCCAGAAGAAGTTTCGGCAATGGTCCTCACCAAAATGAAGCAAATCGC 24276 Query 195679 GGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAG 195738 || |||| | | || | |||||| | || || || ||||| || || || |||| Sbjct 24277 TGAGTCTTACCTCGGACACGAAGTGAAAAACGCCGTCGTCACTGTTCCAGCATATTTCAA 24336 Query 195739 TGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAG 195798 || | ||| ||||||| || ||||| || | |||| || || || || | || | Sbjct 24337 CGACGCCCAAAGACAGGCCACCAAGGATGCCGGAACTATCGCAGGACTCAATGTTGTTCG 24396 Query 195799 AATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGA 195858 || ||||| || |||||||| ||||| || |||||||| || |||||||| ||| | Sbjct 24397 CATCATCAACGAGCCAACAGCTGCTGCCATCGCTTATGGACTTGACAAGAA---GGAAGG 24453 Query 195859 AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAA 195918 ||| || | | | || ||| | || ||||| || || || || || || |||| Sbjct 24454 AGAGCGCAACATTCTCGTTTTCGATTTGGGAGGTGGAACTTTCGACGTTTCTCTCCTCAC 24513 Query 195919 TATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGA 195978 || || || | |||||||| || || || || ||||| | || || || Sbjct 24514 CATCGACAACGGAGTTTTCGAAGTTCTCGCCACCAACGGAGACACTCACTTGGGAGGAGA 24573 Query 195979 AGATTTCGATGCACGTCTT 195997 |||||||||| |||| || Sbjct 24574 AGATTTCGATCAACGTGTT 24592 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 7/193 (4%) Strand=Plus/Plus Query 195317 GGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAAT 195376 ||||| |||||||| ||||| || |||| | |||| ||||| |||||||| | || Sbjct 23864 GGAACCACTTACTCCTGTGTCGGAGTATTCAAGAATGGACGTGTTGAGATTATTGCCAAC 23923 Query 195377 GACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC---AGATAA---TGAACGT 195430 |||||||||||| | | || || || |||||||||||| | ||| | |||||| Sbjct 23924 GACCAAGGAAACAGAATCACCCCTTCATACGTTGCCTTTTCTGGAGAGCAAGGAGAACGT 23983 Query 195431 CTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGAC 195490 | | ||||||||||| || || ||| | || |||||| || || |||| ||| Sbjct 23984 TTGATCGGAGATGCCGCTAAGAACCAGCTTACCATCAACCCTGAAAACACGATCTTCGAC 24043 Query 195491 GCGAAGCGTCTTA 195503 || ||||| |||| Sbjct 24044 GCCAAGCG-CTTA 24055 >seq1110 Length=27968 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 196616 GAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGG 196674 |||||||||||| || || | ||||| ||||||| ||||||| |||||| | || || Sbjct 18937 GAAGGAGAACGC-CCAATGACCAAGGACAACCATCAGCTTGGAAAGTTCGATCTTACCGG 18995 Query 196675 GATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAA 196734 | ||| | ||||| | || |||||||| || | ||| |||||| || |||| || Sbjct 18996 ACTCCCACCAGCACCACGTGGAGTTCCACAAATCGAAGTTACCTTCGAAATCGACGTCAA 19055 Query 196735 TGGAATTCTAAACGTCACAGCTGAGGACAAGG 196766 ||||| || |||| || |||||||| |||| Sbjct 19056 CGGAATCCTTCACGTTACTGCTGAGGATAAGG 19087 >seq868 Length=32787 Score = 89.7 bits (98), Expect = 7e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 || ||||||||||| || || ||| | |||||| ||||| || | || || || Sbjct 19966 ATGAAGATGAAGGAAACCGCCGAAAGCTATTTGGGTACCACTGTTAACAACGCTGTCGTC 19907 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || || || |||| ||||| ||||| || || || |||||||| | ||| Sbjct 19906 ACTGTTCCAGCCTATTTCAACGATTCTCAACGTCAAGCCACCAAGGACGCCGGACAGATT 19847 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | || | ||| |||| | |||||||||| ||||| || ||||| | || || || Sbjct 19846 TCCGGATTGAACGTTCTTCGTGTTATCAATGAGCCAACTGCCGCTGCTCTCGCCTACGGA 19787 Query 195839 CTGGACAAGAAC 195850 |||||||| || Sbjct 19786 TTGGACAAGGAC 19775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657736904523920