Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20sinica_20[WormBase_20PRJNA194557-WS256_202016-12- 10] 15,261 sequences; 131,797,386 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1864 82.4 1e-10 >seq1864 Length=19213 Score = 82.4 bits (90), Expect = 1e-10 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 168649 AAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATA 168708 ||||||| ||| | || ||| |||||||||| || ||||||||| ||||| |||| Sbjct 14367 AAGAAGGAGATCTCGGACCAGTTTATGGATTCCAGTGGAGACATTTCGGAGCGAAATACG 14308 Query 168709 TTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATT 168751 | || ||| | ||||| ||||| ||||||||||| || || || Sbjct 14307 TGGATTGTCACACAGACTACACTGGACAAGGAGTCGATCAGTT 14265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635056431933080