Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq447 111 1e-19 >seq447 Length=79233 Score = 111 bits (122), Expect = 1e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 118177 TTCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATAC 118236 |||| || | || || ||||| ||||||||||||| || || | |||||| || | || Sbjct 30407 TTCCATCTCTTCCCGCTCTTCCAGTCTCTTGATAATATCCTTCGATTGATTTTGGTAGAC 30466 Query 118237 TGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCG 118296 ||| ||| ||||| ||||| || || ||||||||||| ||||| ||||| || || |||| Sbjct 30467 TGTAATGGATCACAAACCGAACATCTGGTTTATCGATTCCCATTCCGAAAGCAATTGTCG 30526 Query 118297 AACATATCACTCGGGTCTCGTTCGCCATCCATCT 118330 ||| ||||| | || ||| |||| ||| || Sbjct 30527 CACAAATCACATCGAACTTGTTGGCCAGCCAGCT 30560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381769705850760