Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq592 336 3e-87 seq437 293 3e-74 seq625 232 8e-56 seq522 150 2e-31 seq623 86.0 8e-12 >seq592 Length=193617 Score = 336 bits (372), Expect = 3e-87 Identities = 827/1239 (67%), Gaps = 19/1239 (2%) Strand=Plus/Minus Query 6626 GATAATCTCCCCTTATCATTCGTAATCGTAAT-CTTTTCGGATTTACCCGAGGCCTTATC 6684 ||||||| ||||| |||||| ||| || || | |||| ||| || | | ||||| Sbjct 59979 GATAATCGTCCCTTTTCATTCCGAATTGTGATTCGATTCGTTTTT-CCAGTTGATTTATC 59921 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 ||||| ||||||| ||| ||||||||||| | ||| || | || | ||| ||||| Sbjct 59920 CTCAGCTGACACATTCAGAATTCCATTTGCATCGATATCAAAAGTGACGTCAATCTGTGG 59861 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 ||| | || || | ||||||||| || || || ||||| || || | ||||| Sbjct 59860 AACACCACGTGGAGCTGGTGGAATACCAGTCAATTCGAATGTTCCGAGACGATGATTATC 59801 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | |||||| ||||| || |||| |||| || | |||||||| || Sbjct 59800 ACGAGTCATGGCACGTTCTCCTTCGTAAACTTGGATTGAGACTCCCGGTTGATTGTCGGC 59741 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 |||| ||| ||| | || | |||||| || |||| ||| | Sbjct 59740 ATATGTTGTGAATGTTTTCAATGCTTTTGTTGGAATTCGAGTGTTTCGATCAATCAGATT 59681 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||| | |||||| |||||| | ||||||| || || | || || | || || Sbjct 59680 GGTCATCACACCACCGGCAGTTTCAATTCCAAGACTCAATGGAGCAACATCAACCAGCAA 59621 Query 6985 CAGGTCTTGAACAGATTCGTTCCCTT-CACCCGTTAAGATGGCGGCTTGGACCGTCGCCC 7043 | |||| | | || | ||| | | || | | | || ||||| || | || | Sbjct 59620 TACATCTTTGATTGTTT-GATCCTTGACTCCAGAGAGTACAGCAGCTTGAACTGCAGCAC 59562 Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103 | | || || || ||||| || ||||| | |||| ||| || ||||| ||| | | Sbjct 59561 CAAAAGCAACAGCTTCATCCGGATTAATTGAACAGTTCAATTCCTTTCCGTTGAAAAAGT 59502 Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 || | | || ||||||||| || | || || ||||| ||||||||||| | ||||| Sbjct 59501 CCTTGAGAAGTTTTTGAATTTTGGGAACACGAGTTGATCCTCCGACCAAAACCACTTCAT 59442 Query 7164 TCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 | ||||||||||||| || | || ||||| | |||||||| ||||||| | | Sbjct 59441 CGATCTTCGATTTATCGAGTTTCGCATCCCGAAGAGCCTTTTCGACTGGTTCCAGAGTCT 59382 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 | ||||| || || ||||| ||| || || || ||||| || || | | | |||| Sbjct 59381 TTCGGAATAAATCAGCACACAATTCTTCGAATCGAGCACGAGTTATTTTGGAACACAAAT 59322 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA---GATAACG 7340 | | || ||| | | ||||||| ||||| || || | | ||| || | | Sbjct 59321 CGATTCCTTCGAAAAGAGAATCAACTTCAACACATGCTT---CAGATGAACTTGAAAGAG 59265 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 ||| |||||| || ||||| || ||||||| ||| | | |||||| || || |||| Sbjct 59264 TTCTCTTTGCACGTTCACATGCAGTTCGTAGACGTCTGATGGCACGTGGATTCGGTGAAA 59205 Query 7401 TATCTTTCTTATGT-TTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATC 7458 |||| || | ||| || ||||| ||||| |||| | |||||| |||| | || ||| Sbjct 59204 TATCCTT-TCCTGTCTTCCGTTTGAACTCATTCATA-AAGTGTTGAAGCATTCGTTGATC 59147 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 || ||||| ||||| | || ||||| || || || | ||| ||||| || || ||| Sbjct 59146 AAAGTCTTCTCCACCAAGATGAGTATCTCCAGCTGTTGATTTCACTTCGAATATTGATCC 59087 Query 7519 TTCAATGTTTAACAAC---GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| || | | |||||||| || ||||| || || || || || || | ||| Sbjct 59086 TTCAGCAATTGAGAGAATTGAAACATCGAATGTACCTCCTCCAAGATCGAAGATCAATAC 59027 Query 7576 GTTCGTATCGTCGTCTTTGTTCTT-ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 ||| | || || ||| | ||| ||| | || || || | ||| || || ||||||| Sbjct 59026 ATTCTTCTCCTCA-CTTATTCCTTTATCCAATCCATAAGCAAGAGCAGCTGCAGTTGGTT 58968 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||| || || |||| |||| |||||||| || || ||||| || |||||||||| Sbjct 58967 CATTGATGATTCGAATTGCATTCAATCCAGCAATTGTAGCTGCATCCTTTGTCGCTTGTC 58908 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 || ||| || ||||| || || || || | || || ||| | ||| | || | Sbjct 58907 TCTGACTATCATTGAAGTATGCAGGTACAGTAATCACTGCATCCTTCACTGAATGTCCAA 58848 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 |||||| || ||| | || ||||| || ||| ||||| | ||| || ||||| | Sbjct 58847 GATACGTCTCTGCGGTCTCCTTCATCTTCTGAAGTACCATTGCTGAGATTTCTTCCGGAT 58788 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCA 7853 || |||||| |||| || || || ||||||||||||| Sbjct 58787 TGAATTGTTTCCTTTCTCCTTTCAATTCAACTTCAATCA 58749 >seq437 Length=118407 Score = 293 bits (324), Expect = 3e-74 Identities = 540/786 (69%), Gaps = 8/786 (1%) Strand=Plus/Minus Query 7175 TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAG 7234 || || ||||| | ||| ||||| | ||| ||||| || ||||| | ||| | Sbjct 84199 TTGTCCATCTTGGCGTCACGAAGAGATTTCTCGACTGGGTCCATGGTGGATCTGAAGAGA 84140 Query 7235 TCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCG 7294 || || |||||||||||||| |||||||| || || ||||| |||| || ||| Sbjct 84139 TCAGCGCAAAGTTCCTCAAAACGAGCACGGGTGATATTGGTGTAGAAGTCAATTCCTTCG 84080 Query 7295 TATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGC 7354 | | ||||| |||||||| | | || | | ||||| | |||| |||||||||| Sbjct 84079 AAAAGAGAATCGATTTCAATCGAAGCCTGGGAAGAGGAAGAGAGTGTTCTCTTTGCGCGC 84020 Query 7355 TCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT 7414 ||||| || || || | ||| |||||||| || |||||| | | ||| ||||| || Sbjct 84019 TCACAAGCTGTACGAAGACGGCGAAGGGCGCGTGGGTTAGACGCGAGATCCTTCTTGTGC 83960 Query 7415 TTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCC 7474 || || || ||||| || ||||| || | | ||||| ||||| || || Sbjct 83959 TTGCGCTTGAACTCAGCAACAAAGTGGTTAACCATGCGGTTGTCGAAGTCTTCTCCTCCA 83900 Query 7475 AAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAAC 7534 | || || || || || || | || ||||| ||||| || |||| ||| | | | Sbjct 83899 AGATGGGTGTCTCCAGCAGTGGACTTTACTTCGAAGATTCCGTCTTCGATGGTGAGGATG 83840 Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTT 7593 ||||||||||| |||||||| || || || |||||||| || || ||| || | || Sbjct 83839 GAAACATCAAAAGTACCACCTCCAAGATCGAAAATGAGAACATTACGT-TCTCCAGCTCC 83781 Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 ||||| ||||||||||| || || || || || ||||| || || |||||||||||| Sbjct 83780 TTTCTTGTCGAGACCGTAAGCAATGGCTGCGGCGGTTGGCTCGTTGATAATACGAAGAAC 83721 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||| || |||| || | | | ||||| || || ||||| || || ||||| || ||||| Sbjct 83720 GTTGAGTCCAGAGATGGCTCCGGCATCCTTAGTGGCTTGACGCTGGGAATCATTGAAGTA 83661 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 ||| ||||| || | ||| || ||| ||||| | | ||||| | | ||| || | || Sbjct 83660 GGCTGGGACAGTGATGACAGCATCCTTGACTGTGGTTCCGAGGAAGGCTTCAGCAGTTTC 83601 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 ||||| || | |||||| || ||||||||||| | | || ||| || || || Sbjct 83600 CTTCATCTTTACCAAAACCATAGAGGAAATCTCTTCTGGAGTGAAGATTTTGGTCTCTCC 83541 Query 7834 GTTAAAATCAACTTCAATCATGGGTTT--ATCC-GCAGCACCGGGGATAACCTTATACGA 7890 || | || |||| || | | || || |||| ||||| | |||||| || | | Sbjct 83540 CTTGTACTCGACTTGAACCTTTGGCTTAGATCCTTCAGCA---GAGATAACTTTGAATGG 83484 Query 7891 CCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTT 7950 ||| | ||||| || ||| ||| | | || || || | |||||| |||||||| Sbjct 83483 CCAGTGCTTCATGTCAGATTGAACCGCTGGATCGTCGAATTTGCGTCCGATGAGACGCTT 83424 Query 7951 TGCATC 7956 ||||| Sbjct 83423 AGCATC 83418 Score = 158 bits (174), Expect = 2e-33 Identities = 394/596 (66%), Gaps = 2/596 (0%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 || || ||| | || |||||||| || || | |||||| || ||||| || || || Sbjct 84872 TCGTCGTCAGCCTTGTACTTTTCGGCCTCGTTGACCATGCGCTCGATGTCATCCTTGGAC 84813 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTC 6687 || | || || ||||| || || || ||||| || | ||| || | | ||| || Sbjct 84812 AAACGTCCTTTGTCATTGGTGATGGTGATCTTGTTTTGCTTT-CCGGTAGACTTGTCGGT 84754 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| || ||||| || || || ||||||| |||||| | || | |||||||| Sbjct 84753 GGCAGAGACGTTCAAGATTCCGTTGGCATCAATATCGAAAGTGACTTCGATTTGTGGAAC 84694 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 || | ||||| | ||||| || | | || || | ||||| || | || ||| | Sbjct 84693 TCCACGAGGTGCCGGCGGAATTCCAGACAGCTCGAACTTTCCAAGCAAGTTATTGTCCTT 84634 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 | | | ||| || ||||||||||||| || ||| | ||||| || || Sbjct 84633 GGTCATGGCACGCTCTCCTTCATAGACTTGGATAAGCACTCCTGGTTGGTTGTCGGAGTA 84574 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || | ||| | || || |||| | |||||| || || |||||| |||| | || Sbjct 84573 GGTGGTGAAAGTCTGAGCTGTCTTTGTTGGAATAGTGGTGTTTCTCTTGATAAGAGCAGT 84514 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| ||| || ||||||| |||||||| || || | ||||| | || | || Sbjct 84513 CATAACACCTCCAGCGGTTTCGATACCAAGAGAAAGTGGAGCGACGTCAAGAAGGAGAAG 84454 Query 6988 GTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047 |||||| |||| || || |||| | ||||||||||| || | || ||||| Sbjct 84453 GTCTTGGACAGCCTCAGATTTGTCTCCCGAGAGAATGGCGGCTTGAACAGCAGCTCCGTA 84394 Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGA 7107 ||||| ||||| || ||||| || | || || ||||| || ||| || ||| || Sbjct 84393 AGCGACGGCCTCGTCTGGGTTGATAGACTTGTTGAGTTCCTTTCCGGAGAAGAGATCAGA 84334 Query 7108 TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 | | | |||| || ||||| || || ||||| ||||| | |||||| |||| Sbjct 84333 AAGAAGCTTCTGAACCTTTGGGATACGGGTAGATCCTCCGACGAGAACGATGTCAT 84278 Score = 86.0 bits (94), Expect = 8e-12 Identities = 134/191 (70%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 || || ||||| | ||||||||||| |||||||| || || || ||||| ||||| Sbjct 83251 AAGACAGTGTTGTGTGGGTTCATGGCAACCTGGTTCTTGGCAGCATCTCCGATCAGACGC 83192 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 ||| | | || || |||||||||||||| || || || || ||||| || || ||| Sbjct 83191 TCAGAGT---CAGTGAAGGCGACGTACGATGGTGTGGTACGGTTTCCTTGATCATTGGCA 83135 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137 || || || || | | || | || || || || || || || ||||| | |||| Sbjct 83134 ATGATCTCGACTTTTCCATGCTGGAAAACTCCAACACAGGAGTAAGTGGTTCCGAGATCA 83075 Query 8138 ATACCGATTGC 8148 || |||| ||| Sbjct 83074 ATTCCGACTGC 83064 >seq625 Length=33334924 Score = 232 bits (256), Expect = 8e-56 Identities = 1013/1584 (64%), Gaps = 84/1584 (5%) Strand=Plus/Plus Query 6570 CATCTTCATCTTTATACTT-TTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||||| ||||| | || || || || | ||||| |||||||| | | || Sbjct 28106029 CATCTTC-TCTTTCGAATTGTTTTGCTTCATTAACCATTCGGTCAATGTCAGCCTGAGAA 28106087 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAAT-CTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 | ||| || || || || ||||| || || |||| |||| || | | ||||||||| Sbjct 28106088 AGTCTTCCTTTTTCGTTTCGGATCGTGATTCTGTTCG-ATTTTCCAGTTGACTTATCTTC 28106146 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| |||||||| || ||||| ||||| |||||||| | |||| ||||||||| Sbjct 28106147 CGCAGAGACATTCAATATCCCATTAGCATCTACATCGAAGGTGACATCAATTTGTGGAAC 28106206 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 || | ||||| | |||||| || || | |||||||| |||||| | || || | Sbjct 28106207 TCCGCGTGGTGCAGGTGGAATTCCAGTCAGTTCAAATGTTCCAAGTTTATGATTGTC--T 28106264 Query 6808 CGCCTTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGT 6865 || | || ||| || ||||| |||||| ||| | || |||| ||||| || Sbjct 28106265 CGAGTCATTGCACGCTCTCCTTCGAAGACTTGAATAGAGACACCAGGCTGATTGTCGGCA 28106324 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAG-ATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 || | ||| | | | | ||||| | ||| ||| || ||||| || | Sbjct 28106325 TAAGTGGTGAAAGTCTTTGATGCCTTAGCAGGGATTCGA-GTGTTTCTGTCGATCAGATT 28106383 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||||| ||| || ||||| | ||||||| || || | ||| || | || || Sbjct 28106384 GGTCATAACACCTCCAGCTGTTTCAATTCCAAGACTCAACGGAGCCACATCAACCAGCAA 28106443 Query 6985 CAGGTCTTGAACAGATTCGTTCCCTTCAC-CCGTTAAGATG-GCGGCTTGGACCGTCGCC 7042 | ||| | || || || | | || || ||| ||| || ||||| || | || Sbjct 28106444 AACGTCCTTAATAGTATCAT--CTTTGACTCCGGAGAGAACAGCTGCTTGAACGGCAGCT 28106501 Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTC---------TTTACCG 7093 ||| |||| || || ||||||||||| |||| |||||||| || | | Sbjct 28106502 CCGAATGCAACGGCTTCATCGGGGTTGATCGAGCAGTTCAGTTCCTGAAAATATTCAAAG 28106561 Query 7094 TTAAAAT------------------AATC---------CGATAACA-----TTTGT---- 7117 |||||| |||| || ||| | |||| Sbjct 28106562 TTAAAAATTCGTTTTCAATTTCGAAAATCTTACCTTTCCGTTAAAAAAGTCTTTGAGCAA 28106621 Query 7118 ----TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGA 7173 || || || || || | ||| ||||| || ||||| || | |||| | || Sbjct 28106622 CTTCTGGATCTTTGGAATCCTTGTTGATCCTCCAACCAACACAACCTCATCGATATTTCC 28106681 Query 7174 TTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAA 7233 ||| || | || | || ||||| | |||||| |||||||||| | || |||||||| Sbjct 28106682 TTTGTCAAGTTTAGCATCCCGAAGCGATTTTTCAACAGGTTCCAAAGTCTTCCGGAACAA 28106741 Query 7234 GTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTC 7293 || || || ||||| || | ||||| || || || |||||| || | || || Sbjct 28106742 ATCAGCGCAAAGCTCCTCGAATCTGGCACGAGTGATCTTTGAATAGAAGTCGGCACCATC 28106801 Query 7294 GTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC---GTTCGCTTTGC 7350 | || || |||| || | || | | | || || | || |||| ||| || Sbjct 28106802 AAACAATGAGTCAACCTCCACAGTAGCCT---CGGTAGAGCTTGACAGAGTTCTCTTGGC 28106858 Query 7351 GCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC-TTTCT 7409 || ||||| || ||||| | |||||||| ||||| || || || ||||| |||| Sbjct 28106859 ACGTTCACAAGCAGTTCGAAGACGACGAATAGCACGTGGATTTGGAGAGATATCCTTTCC 28106918 Query 7410 TATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCA 7468 | ||| ||||| ||||| |||| ||||||| |||| | || |||||||| ||||| Sbjct 28106919 GGTCTTT-CGTTTGAACTCATTCAT-GAAGTGTTGAAGAATTCGAGAATCGAAGTCTTCT 28106976 Query 7469 CCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT 7528 || || | || ||||| || || || | | | ||||| || ||| ||||| | | Sbjct 28106977 CCTCCTAGATGAGTATCTCCTGCAGTAGATCTCACTTCGAAAATAGAACCTTCGGCGATC 28107036 Query 7529 AACAAC---GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | | ||||||||||| || || || |||| || ||||| | |||||| | || Sbjct 28107037 GAGAGAATTGAAACATCAAATGTTCCTCCTCCCAAATCGAAAATCAAAACGTTCTTCTCC 28107096 Query 7586 TC-GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 || || || | ||||| | || || || | ||| || |||||||||||||| || || Sbjct 28107097 TCAGTGATTCCT-TTATCTAATCCATAAGCCAAAGCAGCTGCCGTTGGTTCATTGATGAT 28107155 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 ||| | ||||| || || |||||||| || ||||| || ||||| ||||| ||| Sbjct 28107156 ACGCATTGCATTCAGACCGGCGATAGTTGCAGCGTCTTTGGTGGCTTGACGTTGACTATC 28107215 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| ||||| || || || || | || || | | |||| | || | || | || Sbjct 28107216 GTTGAAGTATGCGGGTACAGTAATCACTGCATTCTTGACAGGATGTCCTAAGTAGGTCTC 28107275 Query 7765 CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTT 7824 || | || ||||| || ||| ||||| | || |||||||| || ||| | | Sbjct 28107276 AGCTGTTTCCTTCATCTTCTGAAGTACCATTGCAGAGATCTCTTCCGCATTAAAATCTCG 28107335 Query 7825 CGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTT 7884 |||| || |||| || ||||| | | || || || | | | || || Sbjct 28107336 TCTTTCTCCTTTAACTTCCACTTCCACAACTGGCTT-TC--CTTGTTTTGATTTCACTTT 28107392 Query 7885 ATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAG 7944 ||| ||||| ||| ||||| ||| ||| || || |||| |||||| || | Sbjct 28107393 GAACGGCCAATGTTTGATATCCGATTGAACCGTTTCCTCATCAAACCGTCTTCCAATTAA 28107452 Query 7945 ACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTC 8004 ||| |||||||||||||| || || | || || || | ||| | || || || || Sbjct 28107453 ACGTTTTGCATCAAAAACGGTATTCTCTGGATTACGAGCGGCTTGATCTTTAGCAGCATC 28107512 Query 8005 CCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCC 8064 |||| ||| | || || || || || || ||||| || || ||||| || || Sbjct 28107513 TCCGACAAGTCTCTCCGTA---TCAGTGAATGCCACGTAGGAAGGCGTCGTCTTGTTTCC 28107569 Query 8065 TTGGTCGTTCGCAATAATTTCTAC 8088 || ||| || | |||||| || Sbjct 28107570 TTCAGAGTTGGCGAGAATTTCGAC 28107593 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || |||||||||||||| || || | ||||| |||||| | || | |||||||| ||| Sbjct 12720221 TTCTATCAGGCATCTACTTCTGAATTATACGGAAAAGTACAAGAGATTCCACAAAGTGAG 12720162 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 || || || || || ||| | || || |||| || ||||| || ||||||||| Sbjct 12720161 AAGACTCCATTCTATCCGAGATCTCCGTATGCTGTTGCTAAGATGTATGGATATTGGATT 12720102 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || |||||| | || | || ||||||||||||||||| || | ||||| || Sbjct 12720101 GTTGTCAATTATCGGGAGGCTTATAAAATGTTTGCATGCAATGGAATTCTTTTCAATCAT 12720042 Query 22624 GAATCACCGAGACGGGGT 22641 || |||||| | ||| Sbjct 12720041 GAGAGCCCGAGAAGAGGT 12720024 >seq522 Length=93629 Score = 150 bits (166), Expect = 2e-31 Identities = 258/371 (70%), Gaps = 5/371 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||| || |||||||| ||||| || ||| || ||||| || | || Sbjct 78077 TCGAAATCTTCTCCTCCCAAGTGAGTATCTCCGTTGGTGGCAAGAACTTCGAAAACCCCA 78018 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | | ||||| ||||| || ||||| |||| || || | || | | Sbjct 78017 TTGTCGATAGTAAGAAGAGAAACGTCAAAGGTTCCACCTCCCAAATCGAATACAAGGATG 77958 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || || |||||| || || || |||||||| || || ||||| ||| Sbjct 77957 TTACGCTCTCCCTCCTT---CTTATCAAGTCCATAAGCGATAGCGGCGGCTGTTGGCTCA 77901 Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||||||| | || ||| || || ||||| || ||| | || ||||| || ||||||| Sbjct 77900 TTAATAATTCTGACCACA-TTAAGTCCAGCGATGGTTCCGGCGTCTTTAGTGGCTTGTCT 77842 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| | ||||| |||||||| || || || || || || | | | |||| | || || Sbjct 77841 TTGAGCGTCGTTGAAGTAGGCTGGAACGGTGACAACAGCATTCTTCACTTCATGTCCAAG 77782 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 ||| ||||| ||||| | ||||| || ||||||||| | |||| ||||| | | Sbjct 77781 ATAAGATTCAGCGATTTGCTTCATCTTAACAAGAACCATAGCGGAAACTTCTTCTGGTGT 77722 Query 7816 AAACTGTTTCG 7826 || ||||||| Sbjct 77721 GAATTGTTTCG 77711 >seq623 Length=908941 Score = 86.0 bits (94), Expect = 8e-12 Identities = 165/241 (68%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 11442 TCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACG 11501 ||||||| | |||| || || |||||||| || || | |||||| || |||| | Sbjct 466977 TCTTTTCCTTCCAACTGCGTCGATTTCATCAATGAACAGAATACAAGGGGAGTTTTTTCT 466918 Query 11502 TGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAA 11561 |||| | ||| |||||||| |||||| | ||||| || || |||||||| | || Sbjct 466917 CGCCATTGAAAACATATCACGAACTCTTGCCGGTCCTACTCCAACGAACATTTCCAAAAA 466858 Query 11562 CGATGACCCCGAACACTGA-ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTA 11620 | || || ||| |||| ||||| ||||| | ||| || || | || || | Sbjct 466857 CTCAGATCCAGAA-ACTGTTATAAATGGAACATTTGCTTCTCCAGCAGTCGCTTTCGCCA 466799 Query 11621 AAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCAC 11680 |||| ||||| || || || ||| || |||| | ||||| | || |||||||||| Sbjct 466798 AAAGCGTTTTTCCCGTTCCAGGTGGTCCAGTTAGAATGGCACCTTTCGGAATTTTAGCAC 466739 Query 11681 C 11681 | Sbjct 466738 C 466738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127520458600