Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq592 212 5e-49 seq625 154 1e-31 seq437 141 7e-28 seq626 134 1e-25 seq522 131 1e-24 seq622 93.3 3e-13 seq542 86.0 5e-11 >seq592 Length=193617 Score = 212 bits (234), Expect = 5e-49 Identities = 544/820 (66%), Gaps = 14/820 (2%) Strand=Plus/Plus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGA 551848 ||||||| ||||||||||||| ||||| |||||| | || || | ||| | ||| Sbjct 59116 TGGAGATACTCATCTTGGTGGAGAAGACTTTGATCAACGAATGCT-TCAACACTTTATGA 59174 Query 551849 A-GATTTTAAACGAAAAAAC--AAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCG 551905 | || || ||||| || | |||| ||| | || | | | || | | || Sbjct 59175 ATGAGTTCAAACGGAAGACAGGAAAG--GATATTTCACCGAATCCACGTGCCATCAGACG 59232 Query 551906 TCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTAT 551965 |||| ||||||| || ||| | || || || |||||||| | || || | | | Sbjct 59233 TCTACGAACTGCATGTGAACGTGCAAAGAGAACTCTTTCAAGTTCATCTGAAGCATGTGT 59292 Query 551966 TGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATT 552025 |||||| ||||| | || || ||||| |||| | | || | | || ||| Sbjct 59293 TGAAGTTGATTCTCTTTTCGAAGGAATCGATTTGTGTTCCAAAATAACTCGTGCTCGATT 59352 Query 552026 TGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAG 552085 ||||| | ||| ||||| | || |||| || | |||||||| ||| | | | | | Sbjct 59353 CGAAGAATTGTGTGCTGATTTATTCCGAAAGACTCTGGAACCAGTCGAAAAGGCTCTTCG 59412 Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 ||| | || | |||||||| || | ||||| | || | || || ||||| || | Sbjct 59413 GGATGCGAAACTCGATAAATCGAAGATCGATGAAGTGGTTTTGGTCGGAGGATCAACTCG 59472 Query 552146 AATTCCTAAAATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAA---TG 552201 |||| ||||||| || | | ||| ||| |||||| || || |||| || | Sbjct 59473 TGTTCCCAAAATTCAAAAACTTCTCAAGGACTT-TTTCAACGGAAAGGAATTGAACTGTT 59531 Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 || ||||||| ||||| |||||||| | |||||| ||| ||||||| ||| | || | Sbjct 59532 CAA---TTAATCCGGATGAAGCTGTTGCTTTTGGTGCTGCAGTTCAAGCTGCTGTACTCT 59588 Query 552262 CTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 ||||| | ||| ||| | | || || | | || || |||||| |||| | || Sbjct 59589 CTGGAGTCAAGGATCAAACAATCAAAGATGTATTGCTGGTTGATGTTGCTCCATTGAGTC 59648 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 |||| | ||||| | || ||| | ||||| ||||| || ||| |||| ||| |||| Sbjct 59649 TTGGAATTGAAACTGCCGGTGGTGTGATGACCAATCTGATTGATCGAAACACTCGAATTC 59708 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | ||| || ||| | || ||| | || |||||| | | || |||| | Sbjct 59709 CAACAAAAGCATTGAAAACATTCACAACATATGCCGACAATCAACCGGGAGTCTCAATCC 59768 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATT 552501 || ||| ||||||||| | | ||| |||||| ||| || || || || | | Sbjct 59769 AAGTTTACGAAGGAGAACGTGCCATGACTCGTGATAATCATCGTCTCGGAACATTCGAAT 59828 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 | |||||||| || ||||| ||||| || || || ||||| || ||||| ||||||| Sbjct 59829 TGACTGGTATTCCACCAGCTCCACGTGGTGTTCCACAGATTGACGTCACTTTTGATATCG 59888 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 |||| ||||||||| |||||||| | ||| |||||||| Sbjct 59889 ATGCAAATGGAATTCTGAATGTGTCAGCTGAGGATAAATC 59928 Score = 167 bits (184), Expect = 2e-35 Identities = 347/506 (69%), Gaps = 18/506 (4%) Strand=Plus/Plus Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || |||||||| |||||| | ||||| || || |||| || ||||| ||||| |||||| Sbjct 58553 ACAACTCCATCATATGTTGCATTCACTGATACAGAACGATTGGTTGGAGATGCGGCAAAA 58612 Query 550145 TATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA 550204 |||| || || ||||||| ||||| | || ||||| || | || ||||||||| Sbjct 58613 GATCAGGCAGCTCGTAATCCAGAGAATACAGTATTCGATGCAAAGAGATTGATTGGAAGA 58672 Query 550205 AGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAAT 550264 ||||| |||| || ||||| | || || |||||||| ||| | ||| || Sbjct 58673 CGTTTTGATGAAGAAACAGTTCAATCCGACTGCAAACATTGGCCATTC---AGTGTGAAA 58729 Query 550265 GTTTCT---GGAAAACCTTATATTGAAGCT--ACTCATGAAGGATCTGTTAAACAATTTT 550319 | || || || ||||||| | | | | ||||| |||||||| Sbjct 58730 GGAAAACAAGGGAAGCCAGTGATTGAAGTTGAATTGA--AAGGAGAAAGGAAACAATTCA 58787 Query 550320 CACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTG-CTTTT 550378 || ||| |||| ||| | ||||| | ||| ||||| | || || || | | | | Sbjct 58788 ATCCGGAAGAAATCTCAGCAATGGTACTTCAGAAGATGAAGGAGACCGC-AGAGACGTAT 58846 Query 550379 GTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAA 550438 |||| || ||| | ||||||||| || |||||||| ||||| || ||||| || Sbjct 58847 CTTGGACATTCAGTGAAGGATGCAGTGATTACTGTACCTGCATACTTCAATGATAGTCAG 58906 Query 550439 CGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAAT 550498 | ||||| || || ||||| | ||||||||| | |||| |||| || |||||| Sbjct 58907 AGACAAGCGACAAAGGATGCAGCTACAATTGCTGGATTGAATGCAATTCGAATCATCAAT 58966 Query 550499 GAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA--CATAA-TGATCAAGAACTT 550555 ||||| ||||| ||||| ||||| |||||| | |||||| |||| ||| |||| Sbjct 58967 GAACCAACTGCAGCTGCTCTTGCTTATGGATTGGATAAAGGAATAAGTGA-GGAGAA--G 59023 Query 550556 AATGTACTCATCTTTGATTGTGGAGG 550581 |||||| | ||||| ||| |||||| Sbjct 59024 AATGTATTGATCTTCGATCTTGGAGG 59049 >seq625 Length=33334924 Score = 154 bits (170), Expect = 1e-31 Identities = 267/384 (70%), Gaps = 8/384 (2%) Strand=Plus/Minus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA--C 552267 || || ||||| || ||||| | || || || ||||||||||| |||| || ||| | Sbjct 28106527 AACCCCGATGAAGCCGTTGCATTCGGAGCTGCCGTTCAAGCAGCTGTTCTCTCCGGAGTC 28106468 Query 552268 AAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 ||| |||| | |||| || | || | || || ||||| |||| | |||||| Sbjct 28106467 AAA--GATG--ATACTATTAAGGACGTTTTGCTGGTTGATGTGGCTCCGTTGAGTCTTGG 28106412 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | ||||||| ||||||| ||||||| ||||| ||||| ||||| ||| || ||| Sbjct 28106411 AATTGAAACAGCTGGAGGTGTTATGACCAATCTGATCGACAGAAACACTCGAATCCCTGC 28106352 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 ||| ||| || | || ||| | || ||||| ||| ||| | |||||| | Sbjct 28106351 TAAGGCATCAAAGACTTTCACCACTTATGCCGACAATCAGCCTGGTGTCTCTATTCAAGT 28106292 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 || |||||||| | | | ||| ||| ||| || ||||||| || ||| | | Sbjct 28106291 CTTCGAAGGAGAGCGTGCAATGACTCGAGACAATCATAAACTTGGAACATTTGAACTGAC 28106232 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 || ||||| ||||| || || ||||| || |||||||| || || |||||| | ||||| Sbjct 28106231 TGGAATTCCACCTGCACCACGCGGAGTTCCACAAATTGATGTCACCTTCGATGTAGATGC 28106172 Query 552566 CAATGGAATTTTGAATGTGACTGC 552589 ||||| || |||||||| |||| Sbjct 28106171 TAATGGGATATTGAATGTCTCTGC 28106148 Score = 154 bits (170), Expect = 1e-31 Identities = 336/492 (68%), Gaps = 12/492 (2%) Strand=Plus/Minus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || |||||| | ||||| | |||| |||| || || || || || || | ||||| Sbjct 28107593 GTCGAAATTCTCGCCAACTCTGAAGGAAACAAGACGACGCCTTCCTACGTGGCATTCACT 28107534 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | | || || || ||||| || ||| |||||||| || ||||||| || Sbjct 28107533 GATACGGAGAGACTT-GTCGGAGATGCTGCTAAAGATCAAGCCGCTCGTAATCCAGAGAA 28107475 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| |||||||||| |||||||||||||||||| | ||| |||| || ||||| | Sbjct 28107474 TACCGTTTTTGATGCAAAACGTTTAATTGGAAGACGGTTTGATGAGGAAACGGTTCAATC 28107415 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC-TGGAAAACCTTATATTGAAG 550289 ||||| || |||||||| || |||| || | | ||||| || | | |||| Sbjct 28107414 GGATATCAAACATTGGCCGTT-CAAAGTGAAATCAAAACAAGGAAAGCCAGTTGTGGAAG 28107356 Query 550290 CTACTCATGAAGGATCTGTTAAAC--AATTTTCA-CCAGAACAAATTTCATCTATGGTTT 550346 | ||||| | | || ||||| | | ||| | || || | ||||| Sbjct 28107355 TGGAAGTTAAAGGA---GAAAGACGAGATTTTAATGCGGAAGAGATCTCTGCAATGGTAC 28107299 Query 550347 TAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 | ||| ||||| ||||||| || || | | || || || | | ||||||| Sbjct 28107298 TTCAGAAGATGAAGGAAACAGCTGAGACCTACT-TAGGACATCCTGTCAAGAATGCAGTG 28107240 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || |||||||| ||||| || || || ||||||||||| || ||||| |||| | | Sbjct 28107239 ATTACTGTACCCGCATACTTCAACGATAGTCAACGTCAAGCCACCAAAGACGCTGCAACT 28107180 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || || || || |||| | ||||| ||||||||||| || || ||||| | || ||| Sbjct 28107179 ATCGCCGGTCTGAATGCAATGCGTATCATCAATGAACCAACGGCAGCTGCTTTGGCTTAT 28107120 Query 550526 GGACTTGATAAA 550537 ||| | |||||| Sbjct 28107119 GGATTAGATAAA 28107108 Score = 118 bits (130), Expect = 9e-21 Identities = 162/222 (73%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||||||| || | || || || ||| ||||| || ||||| || | ||||| Sbjct 31079078 GAGACGGAGAACCAAGTGGAGAGTCGACTCCTTTTGG--ATGTTGTAGTCGGAGAGAGTA 31079021 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||| || ||||| |||||||| || || |||||||||||||| || ||||||||| Sbjct 31079020 CGTCCATCCTCGAGTTGCTTTCCGGCGAAGATCAGTCTTTGCTGATCTGGTGGAATTCCT 31078961 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || || ||||| || || || || ||| || ||||| | | | | | |||||| Sbjct 31078960 TCCTTGTCTTGGATCTTAGCCTTGACATTCTCGATGGTATCGGAG-GCCTCGACTTCGAG 31078902 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| ||| ||||| || ||||| || ||||| |||||||| Sbjct 31078901 GGTAATAGTCTTACCCGTCAGAGTCTTGACGAAGATTTGCAT 31078860 Score = 87.8 bits (96), Expect = 1e-11 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 930657 GTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGT 930716 || ||| |||||||||| ||||| ||||| ||||| |||||||| ||||||||||| | Sbjct 24761438 GTTTTAGTTGATTTTTCATCACCTAATATCGCCAAGGAAATGCACGTTGGACATTTGAGA 24761379 Query 930717 TCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGA 930764 |||||||| || ||||| || | ||| | | | ||||| | |||| Sbjct 24761378 TCTACCATCATAGGAGATTCAATTTGTCGGCTTTTTGAATCTGTTGGA 24761331 >seq437 Length=118407 Score = 141 bits (156), Expect = 7e-28 Identities = 263/383 (69%), Gaps = 6/383 (2%) Strand=Plus/Plus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA--C 552267 || ||||| ||||| || || || || || || ||||||| || ||||| || ||| | Sbjct 84373 AACCCAGACGAGGCCGTCGCTTACGGAGCTGCTGTTCAAGCCGCCATTCTCTCGGGAGAC 84432 Query 552268 AAA-CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 ||| |||| | | ||| | || | ||| | || || |||| || ||||||||| Sbjct 84433 AAATCTGAGGCTG---TCCAAGACCTTCTCCTTCTTGACGTCGCTCCACTTTCTCTTGGT 84489 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | ||||| | ||||||| |||||||| ||||||| | ||||| || |||||||| Sbjct 84490 ATCGAAACCGCTGGAGGTGTTATGACTGCTCTTATCAAGAGAAACACCACTATTCCAACA 84549 Query 552387 AAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446 || | | ||| || | || || || || || ||| | | || || ||| | Sbjct 84550 AAGACAGCTCAGACTTTCACCACCTACTCCGACAACCAACCAGGAGTGCTTATCCAAGTC 84609 Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA 552506 | ||||||||| | | || || || ||||| ||||| | || | | Sbjct 84610 TATGAAGGAGAGCGTGCCATGACCAAGGACAATAACTTGCTTGGAAAGTTCGAGCTGTCT 84669 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 || ||||| || || ||||||||||| || ||||| ||||| ||||||||||| |||||| Sbjct 84670 GGAATTCCGCCGGCACCTCGTGGAGTTCCACAAATCGAAGTCACTTTCGATATTGATGCC 84729 Query 552567 AATGGAATTTTGAATGTGACTGC 552589 || ||||| ||||| || |||| Sbjct 84730 AACGGAATCTTGAACGTCTCTGC 84752 Score = 140 bits (154), Expect = 3e-27 Identities = 194/271 (72%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 550314 AATTTTCAC--CAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAG 550371 ||| ||||| ||||| | ||||| ||||||||||| | || ||||| |||| || Sbjct 83552 AATCTTCACTCCAGAAGAGATTTCCTCTATGGTTTTGGTAAAGATGAAGGAAACTGCTGA 83611 Query 550372 TGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGA 550431 || || | || ||| | |||||| || || ||||| ||||| || || ||||| Sbjct 83612 AGCCTTCCTCGGAACCACAGTCAAGGATGCTGTCATCACTGTCCCAGCCTACTTCAATGA 83671 Query 550432 CTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTAT 550491 || || |||||||| ||||| ||||| ||| || ||||||| || ||||||||||| Sbjct 83672 TTCCCAGCGTCAAGCCACTAAGGATGCCGGAGCCATCTCTGGACTCAACGTTCTTCGTAT 83731 Query 550492 TATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGA 550551 |||||| || || || || || || |||| || || || || || | | | ||| Sbjct 83732 TATCAACGAGCCAACCGCCGCAGCCATTGCTTACGGTCTCGACAAGAAAGGAGCTGGAGA 83791 Query 550552 ACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || |||||| ||||| || ||| ||||||| Sbjct 83792 ACGTAATGTTCTCATTTTCGATCTTGGAGGT 83822 >seq626 Length=20921866 Score = 134 bits (148), Expect = 1e-25 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | ||||| ||||| ||||| |||||||| |||||||||||||| || |||| Sbjct 18715052 ATGCTGTCGTCACTGTTCCAGCTTATTTCAATGACTCTCAACGTCAAGCTACCAAGGATG 18715111 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||||| ||| ||||||| || ||||||||| | ||||| || || |||||||| || | Sbjct 18715112 CTGGACAAATTTCTGGACTCAACGTTCTTCGTGTCATCAACGAGCCAACTGCTGCCGCTC 18715171 Query 550518 TTGCATATGGACTTGATAA 550536 |||| || ||| | ||||| Sbjct 18715172 TTGCTTACGGATTAGATAA 18715190 Score = 125 bits (138), Expect = 6e-23 Identities = 326/490 (67%), Gaps = 23/490 (5%) Strand=Plus/Plus Query 368583 TGATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATC--T 368640 ||||||| | |||| |||| |||| |||||||||||||| || | || || | Sbjct 4212515 TGATTGGGCTGTTTCGAGAAACCGGTTCTGGGGAACTCCAAT--CAATTTGTGGGTCAGT 4212572 Query 368641 GATGATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGT 368700 || ||||| |||||| |||||||| | || || || ||| | ||| | || || Sbjct 4212573 GACGATGGAGAAGAAGTTGTTTGTGTTGGAAGTATCGCCGAGTTGGAGGAACTTTCCGGA 4212632 Query 368701 GTGCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAG 368760 ||||| || | ||| | |||| || | | ||| |||| | |||||||| Sbjct 4212633 ---CAAAAGATCACTGACCTTCATAGAGAAAGTGTCGATGACATCACTATTCCATCTCGT 4212689 Query 368761 AAAGGAAAAGGTTTATTGTCTC----GAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATC 368816 |||| || | |||| ||||| || |||||| |||||||||||||| || Sbjct 4212690 TCAGGACGTGGAGT----TCTCAAGAGAGTTTCAGAAGTTTTCGATTGCTGGTTTGAGTC 4212745 Query 368817 AGGTTCTATGCCTTATGGTCAAATACATTATCCATTTGATAAC-GCAAAATACTTTGATA 368875 || || ||||| || | ||||| ||||||||||| || ||| | || || ||| || Sbjct 4212746 CGGATCCATGCCATACGCTCAAAACCATTATCCATTCGAGAACCGGAAGAT-CTTCGAG- 4212803 Query 368876 ATGATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGT 368935 ||||| | |||||||| | | || |||||||||||| ||||| |||| Sbjct 4212804 --GATAAC---TTCCCAGCTGATTTCATCGCTGAGGGAATTGATCAAACTCGTGGATGGT 4212858 Query 368936 TTTATACCCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAA 368995 | || || || | || | || || ||| ||||| |||| || | || |||||| | | Sbjct 4212859 TCTACACTCTTCTTGTTCTTTCAACTGCTCTTTTCAATAAGCCACCATTCAAAAATCTTA 4212918 Query 368996 TAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAAAGTAAGGGTAATT 369055 | | |||| | ||| || || ||||| || ||||| ||||| ||| |||| Sbjct 4212919 TCTGCAATGGTCTCGTTCTGGCGTCAGATGGAGCTAAAATGTCCAAAAGAAAGAAGAATT 4212978 Query 369056 ATTCCGATCC 369065 || | ||||| Sbjct 4212979 ATCCAGATCC 4212988 >seq522 Length=93629 Score = 131 bits (144), Expect = 1e-24 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 |||||||| |||||||| || |||| |||||||| | | || ||||| |||| || Sbjct 77713 AAACAATTCACACCAGAAGAAGTTTCCGCTATGGTTCTTGTTAAGATGAAGCAAATCGCT 77772 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 ||| | |||| || ||||| | | |||| || | || || ||||| || || || Sbjct 77773 GAATCTTATCTTGGACATGAAGTGAAGAATGCTGTTGTCACCGTTCCAGCCTACTTCAAC 77832 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGT 550489 ||| | ||| | ||||| |||||||| || ||| || |||||||||||||| | | Sbjct 77833 GACGCTCAAAGACAAGCCACTAAAGACGCCGGAACCATCGCTGGACTTAATGTGGTCAGA 77892 Query 550490 ATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||| ||||| || || || || || | || |||||||||||||| Sbjct 77893 ATTATTAATGAGCCAACAGCCGCCGCTATCGCTTATGGACTTGATAA 77939 >seq622 Length=1189296 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 550388 GAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCT 550447 ||||| | | | || || | ||||| ||||| || || || ||| | |||||||||||| Sbjct 643187 GAAGTCAAGCACGCCGTCGTTACTGTCCCAGCCTACTTCAACGACGCTCAACGTCAAGCT 643246 Query 550448 ACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACT 550507 || || || || ||| || |||||| | || ||| ||||||||||||| || || || Sbjct 643247 ACCAAGGACGCCGGAACCATCGCTGGATTGAACGTTGTTCGTATTATCAACGAGCCAACC 643306 Query 550508 GCTGCTGCACTTGCATATGGACTTGATAA 550536 || || || | || || |||||||| || Sbjct 643307 GCCGCCGCTATCGCCTACGGACTTGACAA 643335 >seq542 Length=114868 Score = 86.0 bits (94), Expect = 5e-11 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| ||||||||||| ||||| |||||||||||||| || ||||| || || Sbjct 76310 TTACCAGCAAAGATAAGTCTTTGTTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTTG 76369 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGT 563450 || || ||| || || |||| | | | | |||||||| | ||| || || || Sbjct 76370 GCCTTGACGTTCTCGATGGTGTCAGAG-GCTTCGACCTCGAGAGTGATAGTCTTTCCGGT 76428 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 || || |||| |||||||||||| Sbjct 76429 GAGGGTCTTAATGAAAATTTGCAT 76452 Score = 86.0 bits (94), Expect = 5e-11 Identities = 156/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 |||||||| || || | ||||| || ||| | ||| || ||||| || | || | Sbjct 76460 CTGAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGG--ATGTTGTAGTCCGAGAGGG 76517 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 | | | ||| || ||||| |||||||| || || | |||||||||||| || || |||| Sbjct 76518 TACGTCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGCTGATCTGGTGGGATTC 76577 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCG 563430 |||| || ||||| || || || || ||| || || |||| | | | | || Sbjct 76578 CTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATAGTGTCAGAG-GCTTCGACCTCA 76636 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||||| || || || || || ||||| ||||| || ||||| Sbjct 76637 AGAGTAATGGTCTTTCCTGTGAGTGTTTTGACGAAGATCTGCAT 76680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029260831800850