Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq592 228 5e-54 seq625 163 2e-34 seq522 158 8e-33 seq626 113 3e-19 seq437 111 1e-18 seq542 105 4e-17 seq622 104 2e-16 seq549 91.5 1e-12 >seq592 Length=193617 Score = 228 bits (252), Expect = 5e-54 Identities = 557/832 (67%), Gaps = 24/832 (3%) Strand=Plus/Plus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGT 475424 |||||||||||||| | ||||||||||| ||||| |||||| | || | | ||| Sbjct 59109 CAACAGCTGGAGATACTCATCTTGGTGGAGAAGACTTTGATCAACGAATGCT-TCAACAC 59167 Query 475425 GTGTTGAA-GATTTCAAGAGGAAAAAT--AAAGTTGATCTTTCAACATCTGCTAAAGCAT 475481 | |||| || ||||| |||| | |||| ||| ||||| | | | || Sbjct 59168 TTTATGAATGAGTTCAAACGGAAGACAGGAAAG--GATATTTCACCGAATCCACGTGCCA 59225 Query 475482 TAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAA 475541 | |||||||| ||||||| ||||||||||| ||| || ||||||| | | || || Sbjct 59226 TCAGACGTCTACGAACTGCATGTGAACGTGCAAAGAGAACTCTTTCAAGTTCATCTGAAG 59285 Query 475542 CTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGG 475601 | ||||||||||||||||||||| |||||||| |||| | | || || | | Sbjct 59286 CATGTGTTGAAGTTGATTCTCTTTTCGAAGGAATCGATTTGTGTTCCAAAATAACTCGTG 59345 Query 475602 CTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAG 475661 || ||| ||||| | ||| ||||| | || |||| || | ||||| || ||| | | Sbjct 59346 CTCGATTCGAAGAATTGTGTGCTGATTTATTCCGAAAGACTCTGGAACCAGTCGAAAAGG 59405 Query 475662 TTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTT 475721 ||| | ||| | ||||| || ||||| | || ||||| | ||| | || ||||| | Sbjct 59406 CTCTTCGGGATGCGAAACTCGATAAATCGAAGATCGATGAAGTGGTTTTGGTCGGAGGAT 59465 Query 475722 CAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAA 475781 |||| | |||| ||||| | || | || | ||| || || || | || | Sbjct 59466 CAACTCGTGTTCCCAAAATTCAAAAACTTCTCAAGGACTTTTTCAACGGAAAGGAATTGA 59525 Query 475782 A---TGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTA 475838 | | || | ||||| |||||||||||||| | ||| ||||| || ||||| ||| Sbjct 59526 ACTGTTCAA---TTAATCCGGATGAAGCTGTTGCTTTTGGTGCTGCAGTTCAAGCTGCTG 59582 Query 475839 TTTTATCAG--GTCA---ATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAAC 475893 | | || | |||| |||| || || | || ||||| || ||||| || | Sbjct 59583 TACTCTCTGGAGTCAAGGATCAAAC---AATCAAAGATGTATTG--CTGGTTGATGTTGC 59637 Query 475894 TCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAA 475953 |||| | | || ||||||| | || || | ||||| ||||| ||||| |||| Sbjct 59638 TCCATTGAGTCTTGGAATTGAAACTGCCGGTGGTGTGATGACCAATCTGATTGATCGAAA 59697 Query 475954 TACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAAC 476013 |||| || ||| ||| || ||| ||| | || ||| | || |||||| | Sbjct 59698 CACTCGAATTCCAACAAAAGCATTGAAAACATTCACAACATATGCCGACAATCAACCGGG 59757 Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGG 476073 || | |||||| | | ||||| ||| | | ||| |||||| | || || Sbjct 59758 AGTCTCAATCCAAGTTTACGAAGGAGAACGTGCCATGACTCGTGATAATCATCGTCTCGG 59817 Query 476074 AACTTTTAATCTTGA-AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 ||| || | |||| |||||||| || ||||| | || ||||| || ||||| || | Sbjct 59818 AACATTCGA-ATTGACTGGTATTCCACCAGCTCCACGTGGTGTTCCACAGATTGACGTCA 59876 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||||| ||||||||||| ||||| ||||| | ||| |||||||| Sbjct 59877 CTTTTGATATCGATGCAAATGGAATTCTGAATGTGTCAGCTGAGGATAAATC 59928 Score = 190 bits (210), Expect = 1e-42 Identities = 354/506 (70%), Gaps = 18/506 (4%) Strand=Plus/Plus Query 474422 ACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAA 474481 ||||| |||||||||||| | || ||||| || |||| | |||||||||| || ||| Sbjct 58553 ACAACTCCATCATATGTTGCATTCACTGATACAGAACGATTGGTTGGAGATGCGGCAAAA 58612 Query 474482 TATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGT 474541 |||| || || |||||| | ||||| | || ||||| || ||||||||||| | Sbjct 58613 GATCAGGCAGCTCGTAATCCAGAGAATACAGTATTCGATGCAAAGAGATTGATTGGAAGA 58672 Query 474542 AATTTTGATGATACCACTGTCCAATCTGATATGCGT-CATTGGCCTTTTAAGGTGATAAA 474600 ||||||||| || || ||||| || ||| |||||||| || | |||| | Sbjct 58673 CGTTTTGATGAAGAAACAGTTCAATCCGAC-TGCAAACATTGGCCATTCAGTGTGAAAGG 58731 Query 474601 TGTTGGTGGTAAACCATATATAGAAGC--AATACACGCAGGTGAAACTAAACAATTTTCA 474658 || || ||| || |||| ||| | ||| |||| |||||||| Sbjct 58732 AAAACAAGGGAAGCCAGTGATTGAAGTTGAATTGAA--AGGAGAAAGGAAACAATTCAAT 58789 Query 474659 CCGGAACAAATTTCTTCAATGGT--TTTAGCCAAAATGAAACAAACCGC-GAGCTCATAT 474715 |||||| |||| || ||||||| || || || ||||| | ||||| ||| | ||| Sbjct 58790 CCGGAAGAAATCTCAGCAATGGTACTTCAG--AAGATGAAGGAGACCGCAGAGA-CGTAT 58846 Query 474716 CTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAA 474775 |||||||| ||| | |||||||| |||||||| || ||||| || |||||| ||| Sbjct 58847 CTTGGACATTCAGTGAAGGATGCAGTGATTACTGTACCTGCATACTTCAATGATAGTCAG 58906 Query 474776 CGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAAT 474835 | ||||| || || ||||| | | |||||| || | |||| | || || || ||| Sbjct 58907 AGACAAGCGACAAAGGATGCAGCTACAATTGCTGGATTGAATGCAATTCGAATCATCAAT 58966 Query 474836 GAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA--GAAT-TCTGACAAAGAAGTA 474892 |||||||| ||||| || ||||||||||| | ||||| |||| ||| ||||| Sbjct 58967 GAACCAACTGCAGCTGCTCTTGCTTATGGATTGGATAAAGGAATAAGTGA-GGAGAAG-- 59023 Query 474893 AATGTTTTAATCTTTGATTGTGGAGG 474918 ||||| || ||||| ||| |||||| Sbjct 59024 AATGTATTGATCTTCGATCTTGGAGG 59049 >seq625 Length=33334924 Score = 163 bits (180), Expect = 2e-34 Identities = 480/738 (65%), Gaps = 55/738 (7%) Strand=Plus/Minus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 |||||| ||||||||||||||||||| ||| || |||| || |||| | ||||| Sbjct 28106882 CGTCTTCGAACTGCTTGTGAACGTGCCAAGAGAACTCTGTCAAGCTCTACCGAGGCTACT 28106823 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 || || ||||| || | ||||| || || | || | || || | || | | Sbjct 28106822 GTGGAGGTTGACTCATTGTTTGATGGTGCCGACTTCTATTCAAAGATCACTCGTGCCAGA 28106763 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || || || |||| ||||| | || | || || | ||||| |||||| || || Sbjct 28106762 TTCGAGGAGCTTTGCGCTGATTTGTTCCGGAAGACTTTGGAACCTGTTGAAAAATCGCTT 28106703 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| |||||||||||||| | | || |||| |||| | || ||||| |||||| Sbjct 28106702 CGGGATGCTAAACTTGACAAAGGAAATATCGATGAGGTTGTGTTGGTTGGAGGATCAACA 28106643 Query 475727 AGAATTCCAAAAATA-AGAG-------AAATGCTTTCATCAT-----------ATTTT-- 475765 || |||||||| || ||| ||| |||| | | ||||| Sbjct 28106642 AGGATTCCAAAGATCCAGAAGTTGCTCAAAGACTTTTTTAACGGAAAGGTAAGATTTTCG 28106583 Query 475766 -AATGGTAAA----------AAGTTAAAT--------GAA----AGTG-----TAAATCC 475797 ||| | ||| | || ||| ||| | || | || || Sbjct 28106582 AAATTGAAAACGAATTTTTAACTTTGAATATTTTCAGGAACTGAACTGCTCGATCAACCC 28106523 Query 475798 TGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGA 475857 |||||||| ||||||| |||||||| || ||||||||| || | || || | ||| | Sbjct 28106522 CGATGAAGCCGTTGCATTCGGAGCTGCCGTTCAAGCAGCTGTTCTCTCCGG--AGTCAAA 28106465 Query 475858 CGAGAAACTA--AATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAA 475915 || |||| || | || | || ||||| || |||| | | || ||||| Sbjct 28106464 GATGATACTATTAAGGACGTTTTGCTGGTTGATGTGGCTCCGTTGAGTCTTGGAATTGAA 28106405 Query 475916 ACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAA- 475974 |||| |||||| ||||||| ||||| || |||||||| |||| ||||| ||| || Sbjct 28106404 ACAGCTGGAGGTGTTATGACCAATCTGATCGACAGAAACACTCGAATCCC-TGCTAAGGC 28106346 Query 475975 ATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGA 476034 |||||| || |||||||| | || ||||| | ||| | || ||| |||| || Sbjct 28106345 ATCAAAGACTTTCACCACTTATGCCGACAATCAGCCTGGTGTCTCTATTCAAGTCTTCGA 28106286 Query 476035 AGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTAT 476094 ||| || | | | ||| ||| ||| | ||||||||||| ||| | || || || Sbjct 28106285 AGGAGAGCGTGCAATGACTCGAGACAATCATAAACTTGGAACATTTGAACTGACTGGAAT 28106226 Query 476095 TCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGG 476154 ||| ||||| || | |||||||| |||||||| || || || ||| | ||||| ||||| Sbjct 28106225 TCCACCTGCACCACGCGGAGTTCCACAAATTGATGTCACCTTCGATGTAGATGCTAATGG 28106166 Query 476155 TATTCTTAATGTTACTGC 476172 || | ||||| |||| Sbjct 28106165 GATATTGAATGTCTCTGC 28106148 Score = 154 bits (170), Expect = 1e-31 Identities = 348/514 (68%), Gaps = 12/514 (2%) Strand=Plus/Minus Query 474411 AAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAG 474470 |||| || | || || || || || || | || ||||| || || ||| | |||| Sbjct 28107571 AAGGAAACAAGACGACGCCTTCCTACGTGGCATTCACTGATACGGAGAGACTTGTCGGAG 28107512 Query 474471 ATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGAT 474530 ||||||||||| ||||||| || |||||| | ||||| |||||||||| ||| | | Sbjct 28107511 ATGCTGCTAAAGATCAAGCCGCTCGTAATCCAGAGAATACCGTTTTTGATGCAAAACGTT 28107452 Query 474531 TGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTA 474590 | ||||| | |||||||| || || ||||| ||||| |||||||| || | Sbjct 28107451 TAATTGGAAGACGGTTTGATGAGGAAACGGTTCAATCGGATATCAAACATTGGCCGTTCA 28107392 Query 474591 AGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACACGCAGGTGAAACTAAAC 474650 | |||| | || || ||| | | |||| | ||| |||| | Sbjct 28107391 AAGTGAAATCAAAACAAGGAAAGCCAGTTGTGGAAGTGGAAGTTAAAGGAGAAAGACGAG 28107332 Query 474651 AATTTTCACCGGAACAAATTTCTTCAATGGT--TTTAGCCAAAATGAAACAAACCGC-GA 474707 | ||| ||||| | || ||| ||||||| || || || ||||| |||| || || Sbjct 28107331 ATTTTAATGCGGAAGAGATCTCTGCAATGGTACTTCAG--AAGATGAAGGAAACAGCTGA 28107274 Query 474708 GCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATG 474767 | | || | ||||| || | ||||||| |||||||| || ||||| || || | Sbjct 28107273 GACC-TACTTAGGACATCCTGTCAAGAATGCAGTGATTACTGTACCCGCATACTTCAACG 28107215 Query 474768 ATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTA 474827 || |||||||||||| || ||||| || | || || || ||||| |||| | |||| Sbjct 28107214 ATAGTCAACGTCAAGCCACCAAAGACGCTGCAACTATCGCCGGTCTGAATGCAATGCGTA 28107155 Query 474828 TTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA--GAAT-TCTGACA 474884 | || ||||||||||| ||||| || | |||||||| | ||||| |||| |||| Sbjct 28107154 TCATCAATGAACCAACGGCAGCTGCTTTGGCTTATGGATTAGATAAAGGAATCACTGA-G 28107096 Query 474885 AAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 ||||| || ||||| || || |||| ||||| Sbjct 28107095 GAGAAG--AACGTTTTGATTTTCGATTTGGGAGG 28107064 Score = 109 bits (120), Expect = 4e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || ||||||||||| || || || || | ||| ||||| || |||||||||||||| Sbjct 31079015 ATCCTCGAGTTGCTTTCCGGCGAAGATCAGTCTTTGCTGATCTGGTGGAATTCCTTCCTT 31078956 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| ||||| |||||| || || ||||| | | ||| |||||||| Sbjct 31078955 GTCTTGGATCTTAGCCTTGACATTCTCGATGGTATCGGAGGCCTCGACTTCGAGGGTAAT 31078896 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||| || |||||||| ||||| ||||| Sbjct 31078895 AGTCTTACCCGTCAGAGTCTTGACGAAGATTTG 31078863 Score = 93.3 bits (102), Expect = 3e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 817092 TTTTAATAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGAT 817151 ||||| | ||||||||||| || ||||| || ||||||||||| ||||||| ||||||| Sbjct 24761437 TTTTAGTTGATTTTTCATCACCTAATATCGCCAAGGAAATGCACGTTGGACATTTGAGAT 24761378 Query 817152 CTACAATAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTA 817207 |||| || || || || || ||||| | | | ||||| | ||||| ||| ||| Sbjct 24761377 CTACCATCATAGGAGATTCAATTTGTCGGCTTTTTGAATCTGTTGGATTTGATGTA 24761322 Score = 86.0 bits (94), Expect = 4e-11 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 817627 GATGGAGGTTTTACTTATGATACTTCTGATTTAGCAGCTTTAAAATATCGTTTATTTGAA 817686 ||||| || || || || ||||||||||||||||| || ||||| || | | ||||| Sbjct 24760745 GATGGTGGATTCACCTACGATACTTCTGATTTAGCTGCATTAAAGTACAGAATGATTGAA 24760686 Query 817687 GAAAA-AGCTAATCAAATATTATATGTAGTTGATTCAGGACAAAGTCTTCATTT 817739 ||||| || | | |||||| ||||| |||||| | ||||||| ||||||||| Sbjct 24760685 GAAAAGTGCGATTGGAATATT-TATGTTGTTGATGCCGGACAAAATCTTCATTT 24760633 >seq522 Length=93629 Score = 158 bits (174), Expect = 8e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG 474706 |||||||| |||| ||| || |||| | |||||| | | || ||||| |||| ||| Sbjct 77713 AAACAATTCACACCAGAAGAAGTTTCCGCTATGGTTCTTGTTAAGATGAAGCAAATCGCT 77772 Query 474707 AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAAT 474766 || ||||||||||| ||||| | |||| || | || |||||||| || || || Sbjct 77773 GAATCTTATCTTGGACATGAAGTGAAGAATGCTGTTGTCACCGTTCCAGCCTACTTCAAC 77832 Query 474767 GATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGT 474826 || ||||| | ||||| |||||||| || |||| || || || |||||||| | | Sbjct 77833 GACGCTCAAAGACAAGCCACTAAAGACGCCGGAACCATCGCTGGACTTAATGTGGTCAGA 77892 Query 474827 ATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 ||||||||||| |||||||| ||||| | |||||||| ||||||||||| Sbjct 77893 ATTATTAATGAGCCAACAGCCGCCGCTATCGCTTATGGACTTGATAAGAA 77942 >seq626 Length=20921866 Score = 113 bits (124), Expect = 3e-19 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | ||||||||||| ||||| ||||| |||||||||||||| || || |||| Sbjct 18715052 ATGCTGTCGTCACTGTTCCAGCTTATTTCAATGACTCTCAACGTCAAGCTACCAAGGATG 18715111 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| |||| | || || || ||| | ||| | || || || ||||| || ||||| | Sbjct 18715112 CTGGACAAATTTCTGGACTCAACGTTCTTCGTGTCATCAACGAGCCAACTGCTGCCGCTC 18715171 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTG 474881 ||||||| || | |||||| || ||| Sbjct 18715172 TTGCTTACGGATTAGATAAGGATGCTG 18715198 >seq437 Length=118407 Score = 111 bits (122), Expect = 1e-18 Identities = 246/367 (67%), Gaps = 4/367 (1%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || || || || || || || ||||||||||| ||||| || ||| | || || | Sbjct 84373 AACCCAGACGAGGCCGTCGCTTACGGAGCTGCTGTTCAAGCCGCCATTCTCTCGGGAGA- 84431 Query 475853 TCAGACGAGAAACTAAATAATA--TTGTACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 || | || || || | || | ||| ||||||| |||||||||| | ||| Sbjct 84432 -CAAATCTGAGGCTGTCCAAGACCTTCTCCTTCTTGACGTCGCTCCACTTTCTCTTGGTA 84490 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 | ||||| | |||||| |||||||| |||||| | ||||| || |||| ||| | Sbjct 84491 TCGAAACCGCTGGAGGTGTTATGACTGCTCTTATCAAGAGAAACACCACTATTCCAACAA 84550 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | | | | | || |||| || || || || ||| || || |||||| ||| Sbjct 84551 AGACAGCTCAGACTTTCACCACCTACTCCGACAACCAACCAGGAGTGCTTATCCAAGTCT 84610 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 |||||| || | | || || || |||||| ||||||| || | || | Sbjct 84611 ATGAAGGAGAGCGTGCCATGACCAAGGACAATAACTTGCTTGGAAAGTTCGAGCTGTCTG 84670 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | ||||| || || || | |||||||| ||||| ||||| ||||| ||||||||||| | Sbjct 84671 GAATTCCGCCGGCACCTCGTGGAGTTCCACAAATCGAAGTCACTTTCGATATTGATGCCA 84730 Query 476151 ATGGTAT 476157 | || || Sbjct 84731 ACGGAAT 84737 Score = 98.7 bits (108), Expect = 6e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| | || |||||| | ||||| |||||| ||||| | |||| || |||| ||| Sbjct 83064 GCAGTCGGAATTGATCTCGGAACCACTTACTCCTGTGTTGGAGTTTTCCAGCATGGAAAA 83123 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || ||||||||||| ||||| || | || |||||||| || || | || ||| Sbjct 83124 GTCGAGATCATTGCCAATGATCAAGGAAACCGTACCACACCATCGTACGTCGCCTTCACT 83183 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAA 474480 || |||| | ||| || ||||||||||| || Sbjct 83184 GACTCTGAGCGTCTGATCGGAGATGCTGCCAA 83215 >seq542 Length=114868 Score = 105 bits (116), Expect = 4e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 480629 CTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688 ||| |||||||| ||||| | ||||||||| ||||||||||||||||||||||| ||||| Sbjct 76309 CTTACCAGCAAAGATAAGTCTTTGTTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTT 76368 Query 480689 TTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGT 480748 ||||| || || || |||| | | || || || ||||| || ||||| Sbjct 76369 GGCCTTGACGTTCTCGATGGTGTCAGAGGCTTCGACCTCGAGAGTGATAGTCTTTCCGGT 76428 Query 480749 GAGAGTCTTAACGAAAATTTG 480769 ||| ||||||| ||||||||| Sbjct 76429 GAGGGTCTTAATGAAAATTTG 76449 Score = 96.9 bits (106), Expect = 2e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || ||||| || || || || | ||| || |||| |||||| Sbjct 76688 CGGAGACGAAGAACGAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTT 76747 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 || || ||||| |||||||| || || ||||| | || || || || || ||||| Sbjct 76748 CTTCCGTCCTCAAGCTGCTTTCCGGCGAAGATAAGTCTCTGCTGGTCTGGTGGGATTCCC 76807 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||||||||| ||||| ||||| ||||| ||||||| | | |||||| Sbjct 76808 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTATCAGAAGCTTCAACCTCAAGG 76867 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| ||||| || || Sbjct 76868 GTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTG 76905 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || ||||| || || || || | ||| || |||| |||||| Sbjct 77419 CGGAGACGAAGAACGAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTT 77478 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 || |||||| || |||||||| || || || || | || || || || || |||||| Sbjct 77479 CTTCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATTCCT 77538 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 ||||||||||| ||||| |||||| ||| || ||||||| | | | || || Sbjct 77539 TCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATGGTATCAGAAGCCTCCA-CCTCCAG 77597 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || ||||| || || | || || ||||| ||||| Sbjct 77598 GGTGATGGTTTTTCCAGTCAACGTTTTGACGAAGATTTG 77636 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| |||||||||||||| || || || | |||||||||||| || || ||||| ||||| Sbjct 76017 ATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTT 76076 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 |||||| ||||| ||||| ||||| || || | | | | || ||| ||| | Sbjct 76077 GTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGGAAGCCTCGACTTCCAA-GGTGA 76135 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || | |||||| ||||| || || Sbjct 76136 TGGTCTTTCCAGTCAAAGTCTTGACGAAGATCTG 76169 >seq622 Length=1189296 Score = 104 bits (114), Expect = 2e-16 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705 || ||||| | || ||| || | || | ||||| | | ||| ||||| ||| ||| Sbjct 643109 AAGCAATTCACCCCAGAAGAAGTCTCCGCTATGGTCCTCGTCAAGATGAAGGAAATCGCT 643168 Query 474706 GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAA 474765 ||| || || || ||| | ||||| | | || || ||||||| ||||| || || || Sbjct 643169 GAG-TCGTACCTCGGAAAGGAAGTCAAGCACGCCGTCGTTACTGTCCCAGCCTACTTCAA 643227 Query 474766 TGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACG 474825 || ||||||||||||| || || || || |||| || || || | || ||| | || Sbjct 643228 CGACGCTCAACGTCAAGCTACCAAGGACGCCGGAACCATCGCTGGATTGAACGTTGTTCG 643287 Query 474826 TATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||||| || || ||||| || ||||| | || || || ||||| ||||| Sbjct 643288 TATTATCAACGAGCCAACCGCCGCCGCTATCGCCTACGGACTTGACAAGAA 643338 >seq549 Length=112515 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || ||||||||||| || || || | |||||| ||||| || || ||||| || || Sbjct 111968 ATCCTCGAGTTGCTTTCCGGCGAAGATTAAACGTTGCTGATCTGGTGGGATTCCCTCTTT 112027 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| ||||| ||||| || || || |||| | | | |||||||| || Sbjct 112028 GTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCAGAGGCTTCAACCTCAAGGGTGAT 112087 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||||||||| ||||| || || Sbjct 112088 GGTCTTTCCAGTGAGAGTCTTGACGAAGATCTG 112120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268150674923420