Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq625 96.9 5e-15 >seq625 Length=33334924 Score = 96.9 bits (106), Expect = 5e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 47782 TGATTTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATA 47841 || ||||| |||||||| ||||||||||| || || |||||||| ||| |||||| Sbjct 12718428 TGTTTTCCAGTGGCAATCACAAAATCATCTGGGGAATCGTGTTGAAGAATTCTCCACATT 12718487 Query 47842 GCCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGC 47882 |||||||| || ||||| || |||||||| |||||||| || Sbjct 12718488 GCCTCGACGTACTCTCTTGCGTGTCCCCAATCACGAAGGGC 12718528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665488868077800