Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq626 96.9 3e-15 >seq626 Length=20921866 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 || || || ||||| || | |||||| ||||| || ||||| ||||| || |||||| Sbjct 6212302 AGAGCTTTTGCGATCTCAGACATGTTCGAAATGACCGTTTTGATTCCGTTTCCTTTTCCT 6212361 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 ||||| ||||| ||| |||||||||||||||||||| | |||||| ||| ||| Sbjct 6212362 TCGACTTTGGCCGAGAGCTTTGGCATTTTGTAGCGGTAGAAGGGGTCCGCGACAGCGCGA 6212421 Query 34624 TTAACGTT 34631 || ||||| Sbjct 6212422 TTCACGTT 6212429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838254047845