Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq592 446 1e-119 seq625 259 4e-63 seq522 181 8e-40 seq437 145 6e-29 >seq592 Length=193617 Score = 446 bits (494), Expect = 1e-119 Identities = 944/1391 (68%), Gaps = 27/1391 (2%) Strand=Plus/Minus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 ||||||||||| | || | |||||| ||||| ||||| ||||| | |||||| ||||| Sbjct 59931 GTTGATTTATCCTCAGCTGACACATTCAGAATTCCATTTGCATCGATATCAAAAGTGACG 59872 Query 281471 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 281530 ||||| || || || || | |||| ||||| || || ||| | |||||||| ||| Sbjct 59871 TCAATCTGTGGAACACCACGTGGAGCTGGTGGAATACCAGTCAATTCGAATGTTCCGAGA 59812 Query 281531 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 281590 || |||||| ||| | ||||| || ||| ||| |||||| | ||| | | | Sbjct 59811 CGATGATTATCACGAGTCATGGCACGTTCTCCTTCGTAAACTTGGATTGAGACTCCCGGT 59752 Query 281591 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTA 281650 ||||| || | ||| ||||| ||| | | || ||| |||||| ||||||| | Sbjct 59751 TGATTGTCGGCATATGTTGTGAATGTTTTCAATGCTTTTGTTGGAATTCGAGTGTTTCGA 59692 Query 281651 TCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACA 281710 ||||| | ||||||||| | |||||| || ||||| | |||||| | |||| ||| Sbjct 59691 TCAATCAGATTGGTCATCACACCACCGGCAGTTTCAATTCCAAGACTCAATGGAGCAACA 59632 Query 281711 TCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGAC--CAACAAGAATAGCTGCTT 281768 ||||| || | | || || | | ||| ||| ||||| || || | ||| |||| Sbjct 59631 TCAACCAGCAATACATCTTTGATTGTTTGATCC--TTGACTCCAGAGAGTACAGCAGCTT 59574 Query 281769 GAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTAC 281828 ||| ||||||||| | |||||||||||||| ||||||| | || | || || | Sbjct 59573 GAACTGCAGCACCAAAAGCAACAGCTTCATCCGGATTAATTGAACAGTTCAATTCCTTTC 59514 Query 281829 CATTGAAAAAAT--TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAAC 281886 | |||||||| | |||| |||||| | | || |||| ||||| ||||||||| || Sbjct 59513 CGTTGAAAAAGTCCTTGA--GAAGTTTTTGAATTTTGGGAACACGAGTTGATCCTCCGAC 59456 Query 281887 TAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC 281946 || || | ||||| | || |||||||| ||||| | |||| | | | ||||| || Sbjct 59455 CAAAACCACTTCATCGATCTTCGATTTATCGAGTTTCGCATCCCGAAGAGCCTTTTCGAC 59396 Query 281947 GGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG 282006 ||||| ||| || || || || | ||| | |||||||||| ||| | ||| | Sbjct 59395 TGGTTCCAGAGTCTTTCGGAATAAATCAGCACACAATTCTTCGAATCGAGCACGAGTTAT 59336 Query 282007 AGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGA 282066 || | |||| ||||||||||| | |||||||||||||| | || || || Sbjct 59335 TTTGGAACACAAATCGATTCCTTCGAAAAGAGAATCAACTTCAACACATGCTTCAGATGA 59276 Query 282067 AGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC 282126 | || || | | || |||||||||||||| || | ||| | || | ||| || Sbjct 59275 ACTTGAAAGAGTTCTCTTTGCACGTTCACATGCAGTTCGTAGACGTCTGATGGCACGTG- 59217 Query 282127 TGATTGATTCAAATCT-GTTTTATAT-TTTCTCTTGAAATCTTCAACACACCATGTT--A 282182 |||| | |||| | ||| | | || | ||||| || | || | |||| | Sbjct 59216 -GATTCGGTGAAATATCCTTTCCTGTCTTCCGTTTGAACTCAT--TCATAAAGTGTTGAA 59160 Query 282183 CAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTT 282242 | || | |||||| ||||| || || | | ||||| ||| | || | | | |||| Sbjct 59159 GCATTCGTTGATCAAAGTCTTCTCCACCAAGATGAGTATCTCCAGCTGTTGATTTCACTT 59100 Query 282243 GGAAAA---GTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATAT 282299 ||| | ||| || ||| || | || | |||||| || || || || | || Sbjct 59099 CGAATATTGATCCTTCAGCAATTGAGAGAATTGAAACATCGAATGTACCTCCTCCAAGAT 59040 Query 282300 CAAAAATAAGTACATTCATTTCTTTGTCTTGGT-TTTTATCAAGACCATACGCAAAAGCA 282358 | || || | ||||||| | || | ||| | |||||| | ||||| |||| |||| Sbjct 59039 CGAAGATCAATACATTCTTCTC-CTCACTTATTCCTTTATCCAATCCATAAGCAAGAGCA 58981 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || |||||||||||||| || |||| | |||| | ||||||||| | ||||||| Sbjct 58980 GCTGCAGTTGGTTCATTGATGATTCGAATTGCATTCAATCCAGCAATTGTAGCTGCATCC 58921 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || |||||||| || ||| || || |||||||| |||||||| || ||||| | Sbjct 58920 TTTGTCGCTTGTCTCTGACTATCATTGAAGTATGCAGGTACAGTAATCACTGCATCCTTC 58861 Query 282479 ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAA-AATCATTGATGA 282537 ||| | ||||| ||| | ||| || | ||||| || || || | ||||| ||| Sbjct 58860 ACTGAATGTCCAAGATACGTCTCTGCGGTCTCCTTCATCTT-CTGAAGTACCATTGCTGA 58802 Query 282538 AATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 282597 |||| ||| ||| |||| || ||| || || ||||||| ||| || Sbjct 58801 GATTTCTTCCGGATTGAATTGTTTCCTTTCTCCTTTCAATTCAACTTCAATCACTGGCTT 58742 Query 282598 --ATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG 282655 || | || | || | |||||||||| ||| || |||||||| ||| Sbjct 58741 CCCTTGTTTTCCTT--TCACACTGAATGGCCAATGTTTGCAGTCGGATTGAACTGTTTCT 58684 Query 282656 TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACT 282715 |||| |||| ||| ||||| |||| |||||||| || | ||||| ||||||| Sbjct 58683 TCATCAAAACGTCTTCCAATCAATCTCTTTGCATCGAATACTGTATTCTCTGGATTACGA 58624 Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 282775 || || |||| ||| || |||||||||| || ||||||| || || |||| ||||||| Sbjct 58623 GCTGCCTGATCTTTTGCCGCATCTCCAACCAATCGTTCTGTATCAGTGAATGCAACATAT 58564 Query 282776 GATGGAGTTGT 282786 ||||||||||| Sbjct 58563 GATGGAGTTGT 58553 Score = 96.9 bits (106), Expect = 3e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 || || || |||||||| ||||||||||||||||| || ||| || ||| || || Sbjct 58998 AATCCATAAGCAAGAGCAGCTGCAGTTGGTTCATTGATGATTCGAATTGCATTCAATCCA 58939 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 |||||| |||| | ||| || ||||||||||| ||||| || ||||| |||||| Sbjct 58938 GCAATTGTAGCTGCATCCTTTGTCGCTTGTCTCTGACTATCATTGAAGTATGCAGGTACA 58879 Query 86236 GTAATAACTGC 86246 ||||| ||||| Sbjct 58878 GTAATCACTGC 58868 >seq625 Length=33334924 Score = 259 bits (286), Expect = 4e-63 Identities = 1019/1582 (64%), Gaps = 88/1582 (6%) Strand=Plus/Plus Query 281308 ATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAA 281367 |||| || ||| |||| ||| ||||| ||| ||||| ||||| | | | | ||| | Sbjct 28106030 ATCTTCTCTTTCGAATTGTTTTGCTTCATTAACCATTCGGTCAATGTCAGCCTGAGAAAG 28106089 Query 281368 TCTTCCGCGATTATTAGTA----ATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAG 281423 |||||| || || || || || || | || ||||| ||||| ||||| Sbjct 28106090 TCTTCC----TTTTTCGTTTCGGATCGTGATTCTGTTCGATTTTCCAGTTGACTTATCTT 28106145 Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483 | |||| ||||| | || ||||| ||||| | ||| || ||||| |||||||| || | Sbjct 28106146 CCGCAGAGACATTCAATATCCCATTAGCATCTACATCGAAGGTGACATCAATTTGTGGAA 28106205 Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543 | || | | |||||||| || || || | ||||||||| || |||| ||| ||| Sbjct 28106206 CTCCGCGTGGTGCAGGTGGAATTCCAGTCAGTTCAAATGTTCCAAGTTTATGATTGTCTC 28106265 Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603 ||| | | || || || ||||| | ||| |||| || ||| ||||| || | || Sbjct 28106266 GAGTCATTGCACGCTCTCCTTCGAAGACTTGAATAGAGACACCAGGCTGATTGTCGGCAT 28106325 Query 281604 AAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 281662 |||| || || | ||| ||| ||| ||| ||| |||||||| || || | |||| Sbjct 28106326 AAGTGGTGAA-AGTCTTTGATGCCTTAGCAGGGATTCGAGTGTTTCTGTCGATCAGATTG 28106384 Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||||| ||| ||||||||||| | |||||| | |||| |||||||| || | | Sbjct 28106385 GTCATAACACCTCCAGCTGTTTCAATTCCAAGACTCAACGGAGCCACATCAACCAGCAAA 28106444 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGA--CCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780 | | | || | ||||| ||||| || |||| ||||||||||| ||||| | Sbjct 28106445 ACGTCCTTAATAGTATCATC--TTTGACTCCGGAGAGAACAGCTGCTTGAACGGCAGCTC 28106502 Query 281781 CATATGCAACAGCTTCATCAGGATT-----AACAGT----TTC--------ATT--TAGT 281821 | ||||||| |||||||| || || | |||| ||| ||| ||| Sbjct 28106503 CGAATGCAACGGCTTCATCGGGGTTGATCGAGCAGTTCAGTTCCTGAAAATATTCAAAGT 28106562 Query 281822 T--------TTTTACCATT--GAAAAAATT---------TGAAAGAAG---TTG------ 281853 | ||| | ||| ||||| || | ||| ||| ||| Sbjct 28106563 TAAAAATTCGTTTTCAATTTCGAAAATCTTACCTTTCCGTTAAAAAAGTCTTTGAGCAAC 28106622 Query 281854 -TCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 281911 ||| | ||| ||||| | | |||||||||||| || |||| |||| | | | | Sbjct 28106623 TTCTGGATCTTTGGAATCCTTGTTGATCCTCCAACCAACACAACCTCATCGATATTTCCT 28106682 Query 281912 TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAG 281971 || || ||||| | |||| | ||||||||| ||||| | | | ||||| Sbjct 28106683 TTGTCAAGTTTAGCATCCCGAAGCGATTTTTCAACAGGTTCCAAAGTCTTCCGGAACAAA 28106742 Query 281972 TCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCG 282031 || | ||||| || |||||| | || | ||| | | || | || || || Sbjct 28106743 TCAGCGCAAAGCTCCTCGAATCTGGCACGAGTGATCTTTGAATAGAAGTCGGCACCATCA 28106802 Query 282032 AACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGT 282091 ||||| || ||||| || | |||| | || || || || | | || |||||| Sbjct 28106803 AACAATGAGTCAACCTCCACAGTAGCCTCGGTAGAGCTTGACAGAGTTCTCTTGGCACGT 28106862 Query 282092 TCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAATCTGTTTTAT 282149 ||||| || || | || | || | || || |||| || | ||| || Sbjct 28106863 TCACAAGCAGTTCGAAGACGACGAATAGCACGTG--GATTTGGAGAGATATCCTTTCCGG 28106920 Query 282150 ATTTTCTCTTGAAATC-TTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCAC 282206 |||| ||||| || |||| | |||| | || ||| ||| || ||||| | Sbjct 28106921 TCTTTCGTTTGAACTCATTCATGA---AGTGTTGAAGAATTCGAGAATCGAAGTCTTCTC 28106977 Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAGAG 282263 |||| | | ||||| ||||| |||| ||| |||| ||||| || || | | | Sbjct 28106978 CTCCTAGATGAGTATCTCCTGCAGTAGATCTCACTTCGAAAATAGAACCTTCGGCGATCG 28107037 Query 282264 ACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT 282323 | | || | ||||||| ||||| || |||| ||| ||||| | || ||| |||| Sbjct 28107038 AGAGAATTGAAACATCAAATGTTCCTCCTCCCAAATCGAAAATCAAAACGTTC--TTCTC 28107095 Query 282324 TGTCTTGGTT--TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 || || |||||| | ||||| || |||||||| || ||||||||||| || || Sbjct 28107096 CTCAGTGATTCCTTTATCTAATCCATAAGCCAAAGCAGCTGCCGTTGGTTCATTGATGAT 28107155 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | || |||| ||||| || || || | || ||||| |||||||| | ||| ||| Sbjct 28107156 ACGCATTGCATTCAGACCGGCGATAGTTGCAGCGTCTTTGGTGGCTTGACGTTGACTATC 28107215 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCT 282501 ||| || ||||| || |||||||| || |||| | || | ||| | || | Sbjct 28107216 GTTGAAGTATGCGGGTACAGTAATCACTGCATTCTTGACAGGATGTCCTAAGTAGGTCTC 28107275 Query 282502 TGCTGTTTGTTTCATTTTACTTAA-AATCATTGATGAAATTTGTTCTGGA-GAATATTGC 282559 ||||||| ||||| || || || | ||||| || || | ||| | | || || | Sbjct 28107276 AGCTGTTTCCTTCATCTT-CTGAAGTACCATTGCAGAGATCTCTTCCGCATTAAAATCTC 28107334 Query 282560 TTGGATTCATTTTGATATGATACTTCAAAATATGG--TTTATTACCAACATTAATAACTT 282617 | ||| || | | ||||| | | ||| || || ||| | |||| Sbjct 28107335 GT-CTTTCTCCTTTAACTTCCACTTCCACAACTGGCTTTCCTTGTTTTGATT--TCACTT 28107391 Query 282618 TAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTA 282677 | || ||||||| ||| ||||| |||||||| ||| |||| ||| ||| ||||||| Sbjct 28107392 TGAACGGCCAATGTTTGATATCCGATTGAACCGTTTCCTCATCAAACCGTCTTCCAATTA 28107451 Query 282678 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCAT 282737 | |||||||||||||||| ||||| ||||||| || ||||||| ||| || |||| Sbjct 28107452 AACGTTTTGCATCAAAAACGGTATTCTCTGGATTACGAGCGGCTTGATCTTTAGCAGCAT 28107511 Query 282738 CTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 282797 |||| | || || || || || |||| || || || || || || || |||| Sbjct 28107512 CTCCGACAAGTCTCTCCGTATCAGTGAATGCCACGTAGGAAGGCGTCGTCTTGTTTCCTT 28107571 Query 282798 GATCATTCGCAATAATTTCAAC 282819 | || || | |||||| || Sbjct 28107572 CAGAGTTGGCGAGAATTTCGAC 28107593 Score = 102 bits (112), Expect = 6e-16 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 131190 TAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTACGGAGCTC 131249 ||||||| || ||||||||| ||||||| |||||| || |||||||||||| || || Sbjct 16293096 TAGCATTCGGAATGGGTATTGATAAACCCGATGTTCGAAATGTTATTCATTATGGTTGTC 16293155 Query 131250 CCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGAG 131303 | || | ||||| |||||||||||||||||| ||||| || | ||||||| Sbjct 16293156 CGAAAGACATTGAGTCTTATTATCAAGAAATTGGAAGAGCCGGCAGAGATGGAG 16293209 >seq522 Length=93629 Score = 181 bits (200), Expect = 8e-40 Identities = 265/374 (71%), Gaps = 3/374 (1%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 || |||||||| |||||||| | ||||| ||| || || |||| ||||| ||| Sbjct 78077 TCGAAATCTTCTCCTCCCAAGTGAGTATCTCCGTTGGTGGCAAGAACTTCGAAAACCCCA 78018 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | || | || | ||||| ||| ||| ||||||||| |||| ||| || | ||| | Sbjct 78017 TTGTCGATAGTAAGAAGAGAAACGTCAAAGGTTCCACCTCCCAAATCGAATACAAGGATG 77958 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 || ||| || | | |||||||| ||||| || | ||| || || ||||| ||| Sbjct 77957 TTACGCTCTCCCTCCT---TCTTATCAAGTCCATAAGCGATAGCGGCGGCTGTTGGCTCA 77901 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 ||||||||||| | |||||||| ||||| || |||| || |||||||||||||||||| Sbjct 77900 TTAATAATTCTGACCACATTAAGTCCAGCGATGGTTCCGGCGTCTTTAGTGGCTTGTCTT 77841 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || | ||||| || || || ||||| || | ||| |||| | ||||| | ||||| | Sbjct 77840 TGAGCGTCGTTGAAGTAGGCTGGAACGGTGACAACAGCATTCTTCACTTCATGTCCAAGA 77781 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAA 282553 |||| || |||| ||||| ||| | || ||| | |||| || |||||| | Sbjct 77780 TAAGATTCAGCGATTTGCTTCATCTTAACAAGAACCATAGCGGAAACTTCTTCTGGTGTG 77721 Query 282554 TATTGCTTGGATTC 282567 |||| || || || Sbjct 77720 AATTGTTTCGACTC 77707 >seq437 Length=118407 Score = 145 bits (160), Expect = 6e-29 Identities = 422/638 (66%), Gaps = 15/638 (2%) Strand=Plus/Minus Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 |||||||||||||| | |||||| | |||||||| || || | || ||||| |||| Sbjct 84091 TCAATTCCTTCGAAAAGAGAATCGATTTCAATCGAAGCCTGGGAAGAGGAAGAGAGTGTT 84032 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA- 282138 | || || || ||||| ||||| | || | || | ||| || | | || | | Sbjct 84031 CTCTTTGCGCGCTCACAAGCTGTACGAAGACGGCGAAGGGCGCGTGG-GTTAGACGCGAG 83973 Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 282198 ||| | || | || | |||||| || ||||| | | || | || || || || Sbjct 83972 ATCCTTCTTGTGCTTGCGCTTGAACTCAGCAACAAAGTGGTTAACCATGCGGTTGTCGAA 83913 Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258 ||||| ||||| | | || | ||| | || | |||||| ||| | ||| ||||| Sbjct 83912 GTCTTCTCCTCCAAGATGGGTGTCTCCAGCAGTGGACTTTACTTCGAAGATTCCGTCTTC 83853 Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318 | | | | | ||||||| || ||||| || | ||| ||||| || ||||| Sbjct 83852 GATGGTGAGGATGGAAACATCAAAAGTACCACCTCCAAGATCGAAAATGAGAACATTACG 83793 Query 282319 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 282378 |||| || || || || ||||| || |||| || || || ||||| || || || Sbjct 83792 TTCTCCAGCTCCTTTCTTGTCGAGACCGTAAGCAATGGCTGCGGCGGTTGGCTCGTTGAT 83733 Query 282379 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 282438 ||| | | ||| || || |||| || ||| ||||| ||||||||||| | || || Sbjct 83732 AATACGAAGAACGTTGAGTCCAGAGATGGCTCCGGCATCCTTAGTGGCTTGACGCTGGGA 83673 Query 282439 ATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGC 282498 ||| || || || || || ||||| || || ||||| | ||| |||| | ||| Sbjct 83672 ATCATTGAAGTAGGCTGGGACAGTGATGACAGCATCCTTGACTGTGGTTCCGA-GGAAG- 83615 Query 282499 GCTT--GCTGTTTGTTTCAT-TTTACTTAAAATCATTGATGAAATTTGTTCTGGA--GAA 282553 |||| || |||| ||||| ||||| |||| ||| || ||||| | ||||||| ||| Sbjct 83614 GCTTCAGCAGTTTCCTTCATCTTTAC-CAAAACCATAGAGGAAATCTCTTCTGGAGTGAA 83556 Query 282554 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTAC---CAACATTA 282610 ||| |||| || | || |||| || | ||| ||| | || || Sbjct 83555 GATT--TTGGTCTCTCCCTTGTACTCGACTTGAACCTTTGGCTTAGATCCTTCAGCAGAG 83498 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAAC 282648 |||||||| |||||||| | ||||| || |||||||| Sbjct 83497 ATAACTTTGAATGGCCAGTGCTTCATGTCAGATTGAAC 83460 Score = 129 bits (142), Expect = 4e-24 Identities = 334/501 (67%), Gaps = 10/501 (2%) Strand=Plus/Minus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 || || || || | ||||| || || | || || |||||||| | ||| || |||||| Sbjct 84767 GTAGACTTGTCGGTGGCAGAGACGTTCAAGATTCCGTTGGCATCAATATCGAAAGTGACT 84708 Query 281471 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 281530 || ||||| || || || | | || || || || || || | || |||| || Sbjct 84707 TCGATTTGTGGAACTCCACGAGGTGCCGGCGGAATTCCAGACAGCTCGAACTTTCCAAGC 84648 Query 281531 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 281590 ||||| || || || | || || || || | | ||||||| ||| | | | Sbjct 84647 AAGTTATTGTCCTTGGTCATGGCACGCTCTCCTTCATAGACTTGGATAAGCACTCCTGGT 84588 Query 281591 TGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCT 281649 || || || || || || || || | |||| | | | || ||||| || |||||||| Sbjct 84587 TGGTTGTCGGAGTAGGTGGTGAA-AGTCTGAGCTGTCTTTGTTGGAATAGTGGTGTTTCT 84529 Query 281650 ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 281709 | |||| | ||||||| ||| ||||| ||||| | |||||||||||| |||| ||| Sbjct 84528 CTTGATAAGAGCAGTCATAACACCTCCAGCGGTTTCGATACCAAGAGAAAGTGGAGCGAC 84469 Query 281710 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAG-TTTG--ACCAACAAGAATAGCTGC 281766 |||| |||| || | ||| | | |||| |||| || ||||| || || Sbjct 84468 GTCAAGAAGGAGAAGGTCTTGGA---CAGCCTCAGATTTGTCTCCCGAGAGAATGGCGGC 84412 Query 281767 TTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTT 281826 ||||| |||||| || || || || || || || || || | || | || |||| || Sbjct 84411 TTGAACAGCAGCTCCGTAAGCGACGGCCTCGTCTGGGTTGATAGACTTGTTGAGTTCCTT 84352 Query 281827 ACCATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAA 281885 || ||| | || |||||||| | ||| ||||| || ||||| | |||||||| | Sbjct 84351 TCCGGAGAAGAGATCAGAAAGAAGCT-TCTGAACCTTTGGGATACGGGTAGATCCTCCGA 84293 Query 281886 CTAATACAATTTCATGCACCT 281906 | | || || ||||| |||| Sbjct 84292 CGAGAACGATGTCATGAACCT 84272 Score = 86.0 bits (94), Expect = 5e-11 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 282697 AGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGT 282756 ||| ||| ||| || | ||| | || | ||||| |||||||| |||||| | || | Sbjct 83246 AGTGTTGTGTGGGTTCATGGCAACCTGGTTCTTGGCAGCATCTCCGATCAGACGCTCAGA 83187 Query 282757 CTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816 || || || | || || ||||| || || || || ||||||||||| ||||| || || Sbjct 83186 GTCAGTGAAGGCGACGTACGATGGTGTGGTACGGTTTCCTTGATCATTGGCAATGATCTC 83127 Query 282817 AACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACC 282873 ||||| |||| || | || || ||||| |||| ||||| | |||||| || Sbjct 83126 GACTTTTCCATGCTGGAAAACTCCAACACAGGAGTAAGTGGTTCCGAGATCAATTCC 83070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740597751310290