Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq625 91.5 2e-13 >seq625 Length=33334924 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 161297 ACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAG 161356 ||||| | |||||| |||| |||||||| || ||| || || || ||||||||| Sbjct 12720236 ACAGAAAAAGTCCGTTTCTATCAGGCATCTACTTCTGAATTATACGGAAAAGTACAAGAG 12720177 Query 161357 ACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTC 161416 | ||||| | || | || || ||||| || ||||||| |||| || ||||| | Sbjct 12720176 ATTCCACAAAGTGAGAAGACTCCATTCTATCCGAGATCTCCGTATGCTGTTGCTAAGATG 12720117 Query 161417 TATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGT 161476 ||||||||||||||||| || || | ||| |||| ||| || | | ||| Sbjct 12720116 TATGGATATTGGATTGTTGTCAATTATCGGGAGGCTTATAAAATGTTTGCATGCAATGGA 12720057 Query 161477 ATTCTATTCAACCATGAG 161494 ||||| ||||| |||||| Sbjct 12720056 ATTCTTTTCAATCATGAG 12720039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729923532460200