Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq626 89.7 2e-12 >seq626 Length=20921866 Score = 89.7 bits (98), Expect = 2e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| | ||||| | ||||||| ||||| || || ||||| || || ||| Sbjct 6579591 ATCCCGATGCTTCGTGTCTACAACAACACAGCTCGTTATGTTGATCAGGGAGGAAACAAG 6579650 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 ||||||||||| ||| |||||||||| ||||| ||||||||||| Sbjct 6579651 CGCCCAGGAGCTTTCGCCATCTACCTTGAGCCATGGCACGCCGA 6579694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588322466880925