Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq7565 82.4 7e-11 >seq7565 Length=2537 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||| ||||||| |||||||| || || || ||| ||| ||| || | Sbjct 227 AATGCAGATTTTCGTCAAAACGTTGACGGGAAAGACGATAACCCTGGAAGTGGAGGCCTC 168 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | ||| || || || |||||||| | ||| ||| || Sbjct 167 AGATACCATTGAAAATGTGAAGGCGAAGATCCAAGACAAAGAAGGAATTCCCCCAGACCA 108 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || || | || ||||| ||||| || || || ||| || || |||||||||| Sbjct 107 GCAGCGATTGATTTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACATTGTCCGATTACAA 48 Query 29141 TATTCAGAAGGAATCTACTCTTCAC 29165 |||||||||||| || || || ||| Sbjct 47 TATTCAGAAGGAGTCGACCCTCCAC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427529409714395