Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq138532 95.1 1e-14 seq6128 89.7 6e-13 seq7416 86.0 7e-12 seq1361 86.0 7e-12 >seq138532 Length=558 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| |||||| |||||| |||||| | ||||||||||| ||||||||||| Sbjct 558 TTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCAC 499 Query 60124 TATACTACCGAGGATTG 60140 |||||||||||||| || Sbjct 498 TATACTACCGAGGACTG 482 >seq6128 Length=2715 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || | Sbjct 1597 ATCAAAAAAGTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 1656 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||||||||||||||||||||||| Sbjct 1657 TACTCACCACTATACTACCGAGGA 1680 >seq7416 Length=2554 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| |||||| |||||| |||||| | ||||||| || ||||||||||| Sbjct 1442 TTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACTCACCAC 1501 Query 60124 TATACTACCGAGGAT 60138 ||||||||||||||| Sbjct 1502 TATACTACCGAGGAT 1516 >seq1361 Length=4051 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||| |||| || |||| |||| |||||| |||||| |||||| | ||||||| || | Sbjct 3172 ATGCAAAACTT-CTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 3230 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||||||||||||||||||||||| Sbjct 3231 TACTCACCACTATACTACCGAGGA 3254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570713212930520