Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq17020 527 2e-145 >seq17020 Length=1896 Score = 527 bits (584), Expect = 2e-145 Identities = 327/349 (94%), Gaps = 1/349 (0%) Strand=Plus/Plus Query 2474 ACAGGTTCTGCTCCCAGTGATGCCAGTGCAATCCGTGCCACTTCCATTTGTTCGCCACGG 2533 || || |||||| |||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1253 ACTGGCTCTGCTTCCAGCAATGCCAGTGCAATCCGTGCCAGTTCCATTTGTTCGCCACGG 1312 Query 2534 GTAAGCCCGTTATCAAGCGGATTTTTAATGAATAATTCGATACGTTCTTTGGTAATAGTG 2593 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1313 GTAAGTCCGTTATCAAGCGGATTTTTAATGAATAATTCGATACGTTCTTTGGTAATAGAA 1372 Query 2594 GTCATAGCTATTTCACCTTAATCTCAACATTTCGCAGCTTTAGCTCTACTGGCAGGTCTG 2653 |||| |||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct 1373 TTCAT-GCTATTTCACCTTAATCTCAACATTTCGCAGCTTTAACTCTATTGGTAGGTCTG 1431 Query 2654 ACTTTCCTGTTAATGCTAATGCGAGATTTTCTGGGGTAATGAGAGCAGTTATTGCTTTCC 2713 ||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||| Sbjct 1432 ACTTTCCTGTTAATGCTAATGCGAGATTTTCAGGAGTAATGAGAGCAGTTATTGTTTTCT 1491 Query 2714 CCATTGCCAGACGAATAATTATTCGTATTTCGCGATCGTCACATGCTCCTGGTCGAACGA 2773 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 1492 CCATCGCCAGACGAATAATCATTCGTATTTCGCGATCGTCACATGCTCCTGGTCGAACAA 1551 Query 2774 TTGATATTTGTCCGTCCATCTCACTCTCCTTTGATGCGAATGCCAGCGG 2822 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1552 TTGATATTTGTCCGTTCATCTCACTCTCCTTTGATGCGAATGCCAGCGG 1600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122204168326422