Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq89190 87.8 2e-12 seq72481 84.2 3e-11 >seq89190 Length=803 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428 ||||| | ||||| ||||| | || ||||| | | ||||||| ||||||||||| ||| Sbjct 296 ATATCTGCGTGCCAAGGTTCGAGATAGATGGCAAAAGCTCCAGGACGTTTGTTTCCACCC 237 Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488 ||||| | |||| ||| |||||||| || || | | ||| |||| || || || ||| Sbjct 236 TGATCCACATATCGAGCAGTGTTATTGTACACACGAAGCATAGGAACAAGCCCATTAGAT 177 Query 63489 ATACCATTGGT 63499 | ||||| || Sbjct 176 GTGCCATTAGT 166 >seq72481 Length=921 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 64028 CTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGT 64087 |||||| | ||| |||| ||||| | || || || ||||||||||| |||||||| || Sbjct 514 CTTGTGCAAATTCGATACAGCTATGCGAGCAGCAAGTATGGCATAATCAGGATGTTGGGT 573 Query 64088 AGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 64147 || | ||||| |||| || |||| | ||||| || || || || ||||| || Sbjct 574 GGTCATCGAAGCTGCGGTTTCTGCCGCCAAGTTATCCAACTCCACTGTGGTCACTCCTTT 633 Query 64148 ATATATTCCTTGAATAACCTTCATAGCTA 64176 |||| |||| ||| || ||||| |||| Sbjct 634 GTATAATCCTCCAATGACTTTCATTGCTA 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628601193905520