Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq7565 111 2e-19 >seq7565 Length=2537 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 |||||||| | || ||||| || ||||| || |||||| || ||||| || ||| Sbjct 18 ACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCCTCG 77 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || ||| | |||| || ||||| || || || || ||||||||||| | Sbjct 78 AGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGG 137 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | ||| | || || | || |||||| || | ||| | |||||| Sbjct 138 ATCTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTT 197 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||||||||| ||||| || ||||| Sbjct 198 CCCGTCAACGTTTTGACGAAAATCTGCAT 226 Score = 107 bits (118), Expect = 2e-18 Identities = 111/143 (78%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 139623 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTT 139682 |||| ||| ||||||||||||||||||||||||| ||||| |||||||| ||| | || Sbjct 2321 TACCTGCAAAGATCAGACGTTGCTGATCGGGAGGAATGCCCTCTTTGTC-TTGAATCTTG 2379 Query 139683 G-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 | || | | || | ||||||| | ||| ||||| | ||| | |||||| || || Sbjct 2380 GCCTTGACATTCTCAATAGTGTCGGAAGCCTCAACCTCGAGGGTAATCGTCTTTCCAGTA 2439 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | |||||||||||| |||||||| Sbjct 2440 AGCGTTTTTACGAAGATTTGCAT 2462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495105920592800