Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq7565 105 5e-18 >seq7565 Length=2537 Score = 105 bits (116), Expect = 5e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | |||||||||||||||||| || | || || | || ||||||||||| Sbjct 35 CTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCCTCGAGCTGCTTGCCGGCAAA 94 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||||||||||| || || | || | |||||||| || |||| | | || || | Sbjct 95 AATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGGATCTTCGCCTTCACATT 154 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| || || ||||| || || | ||||| || ||||| || | ||||| || Sbjct 155 TTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTTCCCGTCAACGTTTTGAC 214 Query 43098 AAAAATTTGCATT 43110 ||||| |||||| Sbjct 215 GAAAATCTGCATT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380651451129522