Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq89190 89.7 7e-13 seq72481 89.7 7e-13 >seq89190 Length=803 Score = 89.7 bits (98), Expect = 7e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 ||||| | ||||| ||||| | || ||||| | | |||| || ||||||||||| ||| Sbjct 296 ATATCTGCGTGCCAAGGTTCGAGATAGATGGCAAAAGCTCCAGGACGTTTGTTTCCACCC 237 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 ||||| | |||| ||| |||||||| || || | | ||| |||| || ||||| ||| Sbjct 236 TGATCCACATATCGAGCAGTGTTATTGTACACACGAAGCATAGGAACAAGCCCATTAGAT 177 Query 72244 GCACCATTGGTC 72255 | ||||| ||| Sbjct 176 GTGCCATTAGTC 165 >seq72481 Length=921 Score = 89.7 bits (98), Expect = 7e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 72783 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGT 72842 |||||| | ||| ||||| ||||| | || || || ||||||||||| |||||||| || Sbjct 514 CTTGTGCAAATTCGATACAGCTATGCGAGCAGCAAGTATGGCATAATCAGGATGTTGGGT 573 Query 72843 AGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 72902 || | ||||| ||||||| |||| | ||||| || || || || ||||| || Sbjct 574 GGTCATCGAAGCTGCGGTTTCTGCCGCCAAGTTATCCAACTCCACTGTGGTCACTCCTTT 633 Query 72903 ATATATTCCTTGGATAACCTTCATAGCTA 72931 |||| |||| || || ||||| |||| Sbjct 634 GTATAATCCTCCAATGACTTTCATTGCTA 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669842986916840