Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq7565 86.0 6e-12 >seq7565 Length=2537 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 143043 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 143102 |||| ||| ||||||||||||||||||||||||| ||||| |||||||| ||| || Sbjct 2321 TACCTGCAAAGATCAGACGTTGCTGATCGGGAGGAATGCCCTCTTTGTCTTGAATCTTGG 2380 Query 143103 GTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 143162 || | | || | ||||| | | || || || | || | |||||| || || | Sbjct 2381 CCTTGACATTCTCAATAGTGTCGGAAGCCTCAACCTCGAGGGTAATCGTCTTTCCAGTAA 2440 Query 143163 ATGTTTTTACGAATATTTGCAT 143184 ||||||||||| |||||||| Sbjct 2441 GCGTTTTTACGAAGATTTGCAT 2462 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 142959 CTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCA 143018 |||||| | ||| | ||||| || | || || || || || || ||||||||| || Sbjct 1 CTCCTCTAAGACGAAGGACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACA 60 Query 143019 TTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTA 143078 ||||| || ||||| || || || ||| | |||| || ||||| || || || | Sbjct 61 ATGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAA 120 Query 143079 TGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTT 143138 | ||||||||||| || || || | | ||| | || || | || || |||| Sbjct 121 TTCCTTCTTTGTCTTGGATCTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTT 180 Query 143139 CAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | | || | |||||| || ||||| ||||| ||||| || ||||| Sbjct 181 CCAGGGTTATCGTCTTTCCCGTCAACGTTTTGACGAAAATCTGCAT 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506035171400880