Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq17020 360 7e-95 >seq17020 Length=1896 Score = 360 bits (398), Expect = 7e-95 Identities = 225/241 (93%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 2694 TTGGTAAAAGTGGTCATAGCTATTTCACCTTAATCTCAACATTTCGCAGCTTTAGCTCTA 2753 ||||||| || |||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 1361 TTGGTAATAGAATTCAT-GCTATTTCACCTTAATCTCAACATTTCGCAGCTTTAACTCTA 1419 Query 2754 CTGGCAGGTCTGACTTTCCTGTTAATGCTAATGCGAGATTTTCTGGAGTAATGAGAACAG 2813 ||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 1420 TTGGTAGGTCTGACTTTCCTGTTAATGCTAATGCGAGATTTTCAGGAGTAATGAGAGCAG 1479 Query 2814 TTATTGTTTTCCCCCTCGCCAGACGAATAATCATGCGTATCTCGCTATCGTCACATGCTC 2873 ||||||||||| || ||||||||||||||||||| ||||| |||| |||||||||||||| Sbjct 1480 TTATTGTTTTCTCCATCGCCAGACGAATAATCATTCGTATTTCGCGATCGTCACATGCTC 1539 Query 2874 CTGGTCGAACAATTGAGATTTGTCCGTTCATCTCACTCTCCTTTGATGCGAATGCCAGCG 2933 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1540 CTGGTCGAACAATTGATATTTGTCCGTTCATCTCACTCTCCTTTGATGCGAATGCCAGCG 1599 Query 2934 G 2934 | Sbjct 1600 G 1600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184914496268936