Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq7565 96.9 2e-15 >seq7565 Length=2537 Score = 96.9 bits (106), Expect = 2e-15 Identities = 142/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 |||||||| || || ||||||||||| ||||| || | || || | ||||| || Sbjct 30 GTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCCTCGAGCTGCTTGCCG 89 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGT 33289 ||| || || || |||||||| | ||| || |||||||| || | | ||||| Sbjct 90 GCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGGATCTTCGCC--- 146 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 || || ||| ||| || || || | || ||||| |||||||| |||||||| | Sbjct 147 TTCACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTTCCCGTCAAC 206 Query 33350 GTTTTTACGAAAATTTGCAT 33369 ||||| |||||||| ||||| Sbjct 207 GTTTTGACGAAAATCTGCAT 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318177316775082