Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq36343 201 2e-47 seq37731 176 7e-40 seq139875 91.5 2e-14 >seq36343 Length=1356 Score = 201 bits (222), Expect = 2e-47 Identities = 194/249 (78%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || ||||| ||||||||||| || || ||||| ||||| |||||||| ||||| |||||| Sbjct 151 CTGCGAGACAACATCCAAGGCATTACGAAGCCGGCTATTCGTCGTCTAGCTCGACGTGGT 210 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 |||||||| ||| | ||||| || |||||||||| | ||||| ||| |||| | ||| Sbjct 211 GGAGTCAAACGTATTTCTGGTCTGATCTATGAAGAAACTCGTGGTGTGCTGAAAGTATTC 270 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| | | || || | ||||||| || ||| ||| ||||| ||||| ||||||||| Sbjct 271 CTCGAAAATGTGATTCGTGATGCTGTCACCTACTGCGAACACGCCAAACGCAAGACTGTC 330 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || |||||||| |||||||||| | ||||||||||| |||| | || || |||||| Sbjct 331 ACTGCCATGGATGTCGTCTATGCTCTCAAACGTCAAGGTCGTACCCTCTACGGATTTGGA 390 Query 16694 AGTTAATCT 16702 | ||| || Sbjct 391 GGATAAACT 399 >seq37731 Length=1331 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| ||||| || |||||||| |||||||||||||||||||| Sbjct 630 GCGAAGCGTCATCGCAAGGTGCTTCGTGACAACATCCAGGGAATCACCAAGCCAGCTATT 689 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| || ||||||||||||||||| || ||| ||||||| || |||| || || | Sbjct 690 CGTCGACTCGCTCGTCGTGGTGGAGTGAAACGTATCTCTGGGCTGATCTACGAGGAAACC 749 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| |||| | ||||| ||| || || | |||||| | ||| |||| Sbjct 750 CGTGGTGTGCTGAAAGTGTTCCTGGAGAATGTGATTCGAGATGCTGTTACCTACTGCGAG 809 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || || | ||||| |||||| | |||||| |||||||||| | || || ||||| Sbjct 810 CATGCGAAGAGAAAGACCGTCACCGCAATGGATGTCGTCTATGCCCTCAAGCGCCAAGGA 869 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | ||||| || ||| | ||| Sbjct 870 CGCACCCTCTATGGATTCGGAGGATAA 896 >seq139875 Length=553 Score = 91.5 bits (100), Expect = 2e-14 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| || || || || | ||| |||||||| |||| || | |||||| || | | Sbjct 553 CGTCGGCTCGCCCGACGCGCTGGCGTCAAGCGAATCTCCGGTCTCATCTATGCTGAAACT 494 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || ||||| ||| | ||||| | || |||| || || || |||| ||| Sbjct 493 CGCGATGTGTTGCGTACTTTCCTATCGTGTGTGATCCGCGACGCGGTCACCTATTGCGAA 434 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| | ||| | || || ||| |||||||| |||| ||||| |||||||||||||| Sbjct 433 CACGCAAGACGAAGTACCGTAACCGCCATGGATGTCGTGTATGCGTTGAAACGTCAAGGA 374 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | || |||||||| Sbjct 373 CGAACTCTCTACGGTTTTGG 354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78933931339737