Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq72481 89.7 6e-13 seq89190 87.8 2e-12 >seq72481 Length=921 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 63977 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGT 64036 |||||| | ||| ||||| ||||| | || || || ||||||||||| |||||||| || Sbjct 514 CTTGTGCAAATTCGATACAGCTATGCGAGCAGCAAGTATGGCATAATCAGGATGTTGGGT 573 Query 64037 AGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 64096 || | ||||| |||| || |||| | ||||| || || || || ||||| || Sbjct 574 GGTCATCGAAGCTGCGGTTTCTGCCGCCAAGTTATCCAACTCCACTGTGGTCACTCCTTT 633 Query 64097 ATATATTCCTTGAATAACCTTCATAGCTA 64125 |||| |||| ||| || ||||| |||| Sbjct 634 GTATAATCCTCCAATGACTTTCATTGCTA 662 >seq89190 Length=803 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 ||||| | ||||| ||||| | || ||||| | | ||||||| ||||||||||| ||| Sbjct 296 ATATCTGCGTGCCAAGGTTCGAGATAGATGGCAAAAGCTCCAGGACGTTTGTTTCCACCC 237 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 ||||| | |||| ||| |||||||| || || | | ||| |||| || || || ||| Sbjct 236 TGATCCACATATCGAGCAGTGTTATTGTACACACGAAGCATAGGAACAAGCCCATTAGAT 177 Query 63438 ATACCATTGGT 63448 | ||||| || Sbjct 176 GTGCCATTAGT 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621744063138440