Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7565 131 1e-25 seq91314 86.0 5e-12 seq67160 84.2 2e-11 >seq7565 Length=2537 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || ||||| || || | || || | ||||||||| | || Sbjct 227 AATGCAGATTTTCGTCAAAACGTTGACGGGAAAGACGATAACCCTGGAAGTGGAGGCCTC 168 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || ||||| || ||| ||||||||||| ||||| || ||||| Sbjct 167 AGATACCATTGAAAATGTGAAGGCGAAGATCCAAGACAAAGAAGGAATTCCCCCAGACCA 108 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | |||||||||||||| || | || |||| |||||| || ||||||||| Sbjct 107 GCAGCGATTGATTTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACATTGTCCGATTACAA 48 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAG 25224 |||||| || || || || || || ||||| || | || ||||||| Sbjct 47 TATTCAGAAGGAGTCGACCCTCCACTTAGTCCTTCGTCTTAGAGGAG 1 >seq91314 Length=789 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || |||||||| | ||||| || | ||| Sbjct 305 ATGCAGATTTTTGTGAAGACTTTGACTGGGAAGACCATCACACTGGAAGTCGAAGCATCT 246 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| ||||| || || || || || Sbjct 245 GACACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCAG 186 Query 25119 CAGCGGATTATTTTTGCCGG 25138 ||||| | |||||||| || Sbjct 185 CAGCGATTGATTTTTGCTGG 166 >seq67160 Length=966 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||| || || || || ||||||| | ||||| ||| | || Sbjct 454 AATGCAAATCTTTGTCAAGACCTTAACTGGAAAGACCATCACGCTTGAAGTCGAGGCTTC 513 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| ||| ||| ||||||||||| || ||||| || || Sbjct 514 GGACACTATTGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCACCAGATCA 573 Query 25118 ACAGCGGATTATTTTTGCCGGCAA 25141 ||| | | || |||||||| || Sbjct 574 GCAGAGACTCATCTTTGCCGGTAA 597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432512009386835