Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7565 98.7 8e-16 >seq7565 Length=2537 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 ||||| || | || || || || ||||| ||||||||| || || ||| ||| || Sbjct 18 ACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCCTCG 77 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || || || | || | ||||| ||||| || ||||| ||||||||||| Sbjct 78 AGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGG 137 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | ||||| ||| || | || || || |||| ||| | ||| || Sbjct 138 ATCTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTT 197 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||||| || ||||||||||| Sbjct 198 CCCGTCAACGTTTTGACGAAAATCTGCAT 226 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 114242 ACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTG 114301 |||||| |||| | ||||| || || |||||||| || |||||||| ||||| Sbjct 1682 ACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATCTTGGC 1741 Query 114302 TTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAG 114361 || | | ||| | ||||| | | |||||| |||| || | || |||||||| || Sbjct 1742 CTTCACATTTTCGATTGTGTCAGAAGCTTCGACTTCCAATGTGATAGTCTTGCCGGTAAG 1801 Query 114362 AGTTTTTACAAAAATCTGCAT 114382 |||||||||||| |||||||| Sbjct 1802 AGTTTTTACAAAGATCTGCAT 1822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419343253970508