Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq7565 147 2e-30 >seq7565 Length=2537 Score = 147 bits (162), Expect = 2e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| || | ||||| || || ||||| |||||||| | | ||||| | || Sbjct 14 AAGGACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATC 73 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||||||| |||| | ||||||||||| || |||||||||||||| || Sbjct 74 CTCGAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTC 133 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| || | ||||| ||| |||||||| | |||| || Sbjct 134 TTGGATCTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGT 193 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| || ||||| ||||| |||||||| |||||| Sbjct 194 CTTTCCCGTCAACGTTTTGACGAAAATCTGCATT 227 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 64296 GCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTA 64355 ||| || || ||| ||||||| |||||||| || |||||||||||||| || || || | Sbjct 2010 GCTACTAACCTGCAAAAATGAGTCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGA 2069 Query 64356 TTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGC 64415 | || ||| ||| || | ||| || || || ||||| | || | ||||||| Sbjct 2070 TCTTAGCCTTGACATTTTCGATTGTGTCGGATGCTTCGACTTCAAGTGTGATAGTCTTGC 2129 Query 64416 CGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||| | |||||||||||||| |||||| Sbjct 2130 CGGTGAGTGTTTTTACGAAAATCTGCATT 2158 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 64319 CGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACT 64378 |||||||| || ||||||||||| ||||| ||||| || || ||| ||| || | | Sbjct 1698 CGCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATT 1757 Query 64379 GTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATT 64438 || ||| || || ||||| | || | ||||||||||| | ||||||||| || || Sbjct 1758 GTGTCAGAAGCTTCGACTTCCAATGTGATAGTCTTGCCGGTAAGAGTTTTTACAAAGATC 1817 Query 64439 TGCATT 64444 |||||| Sbjct 1818 TGCATT 1823 Score = 82.4 bits (90), Expect = 8e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 64297 CTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTAT 64356 || ||| || ||| | || | |||||||| || |||||||||||||| || || || | Sbjct 1382 CTACTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGA- 1440 Query 64357 TTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGC 64415 | || ||||| ||| ||| | |||||| || || ||||| | || | |||||| | Sbjct 1441 TCTTAGCTTTCACATTCTCAATTGTATCGGATGCTTCAACTTCCAGGGTGATGGTCTTCC 1500 Query 64416 CGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | |||| ||| || ||||| || |||||| Sbjct 1501 CAGTCAGAGTCTTCACGAAGATCTGCATT 1529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498679804769960