Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq117987 1014 0.0 >seq117987 Length=650 Score = 1014 bits (1124), Expect = 0.0 Identities = 574/582 (99%), Gaps = 0/582 (0%) Strand=Plus/Minus Query 1 CATTCCGGAAACGTGAACCAGGGGTTTCATCTGCGGAACATCAATCAACGCCATCAGTTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 582 CATTCCGGAAACGTGAACCAGGGGTTTCATCTGCGGAACATCAATCAACGCCATCAGTTT 523 Query 61 GTGTTTATTACGATGGGTAAAGAGATAATCAAACAGGCGTGGTTGACGCGTTTTTACCAG 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 522 GTGTTTATTACGATGGGTAAAGAGATAATCAAACAGGCGTGGCTGACGCGTTTTTACCAG 463 Query 121 TTTCGCCATCGCAATAGTGGCGTACACATCAGCCATCGCATCGTGGGCGTTGCTATGTTC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 462 TTTCGCCATCGCAATAGTGGCGTACACATCAGCCATCGCATCGTGGGCGTTGCTATGTTC 403 Query 181 AATACCATTCGCTTTGGTTAAATGCTCAAGGCGAAAGCTCGGTAGACCGTCATCATTTTC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 402 AATACCATTCGCTTTGGTTAAATGCTCAAGGCGAAAGCTCGGTAGACCGTCATCATTTTC 343 Query 241 AGGCCAGTTTATTCCTTCCGGGCGCAGGGCATAGCAGGCACGCATAACATCCAGTAAATC 300 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 342 AGGCCAGTTTATTCCTTCCGGGCGCAGGGCATAACAGGCACGCATAACATCCAGTAAATC 283 Query 301 CCAGCGCGAGTTATCATGCTGCCAGCTCCAGGCGTAAGGATCGTAGAAATTACGATAAAA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 282 CCAGCGCGAGTTATCATGCTGCCAGCTCCAGGCGTAAGGATCGTAGAAATTACGATAAAA 223 Query 361 AACGTTGCGTGTGACTTCGTCGTCGAAACGCACATTGTTGTAGCCCAGAATACAGGTCTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 AACGTTGCGTGTGACTTCGTCGTCGAAACGCACATTGTTGTAGCCCAGAATACAGGTCTT 163 Query 421 CGGTACGGTAAAAAGCGAGTGAATACGGGCGGCAAATGCGGCTTCGTTTTCTCCTTTCGC 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 162 CGGTACGGTAAAAAGCGAGTGAATACGGGCGGCAAACGCGGCTTCGTTTTCTCCTTTCGC 103 Query 481 CCGAGCTTCCTGCGGGGTAATACCGGTAATTAATACTGCTCCAGGCTGGGGTAAATAGTC 540 ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 102 CCGTGCTTCCTGCGGGGTAATACCGGTAATTAATACGGCTCCTGGCTGGGGTAAATAGTC 43 Query 541 ATCCGCGGGCTTGCAGTAAAAGACTTCGGGTTCGCCGATGAC 582 ||| ||||||||||||||||||||||||||||| |||||||| Sbjct 42 ATCAGCGGGCTTGCAGTAAAAGACTTCGGGTTCTCCGATGAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198384136819722